Query= MSMg01no147_p10.b1 MSMg01no147_p10.b1 CHROMAT_FILE:
MSMg01no147_p10.b1 PHD_FILE: MSMg01no147_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:42 2005
(370 letters)
>mm_chrX_158556453_158557222
Length = 770
Score = 658 bits (340), Expect = 0.0
Identities = 361/370 (97%), Gaps = 4/370 (1%)
Strand = Plus / Minus
Query: 5 gaattcagttggggcacatatgtcagaatatgctggttttaaaaatacgtgctatctttt 64
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 446 gaattcagttggggcatatatgtcagaatatgctgtttttaaaaatacgtgctatctttt 387
Query: 65 tgttagtagtaggacactaaatgacttgtttcttgagagaggaaggtcaggtgtggtttt 124
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 386 tgttagtagtaggacactaaatgatttgtttcttgagagaggaaggtcgggtgtggtttt 327
Query: 125 ttttttttaagctatgaagtgctattgtttatatttttaaatagcattagttctgttagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttttttttaagctatgaagtgctattgtttatatttttaaatagcattagttctgttagg 267
Query: 185 agctgctttagacagccacatcaaagggtgctctccatctctctgtctcagtctctgtct 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 266 agctgctttagacagccacatcaaagggtgctctccgtctctctgtctcagtctctgtct 207
Query: 245 cctgtgtatgcatgtgagtgtctgtgtgtgtgtgtgtgt----ctgtgtaccacatatgt 300
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 206 cctgtgtatgcatgtgagtgtctgtgtgtgtgtgtgtgtgtgtctgtgtaccacatatgt 147
Query: 301 ttgtgtagggtagtttggattgccgagtcagactgacctctcaggtctaaatttaactta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttgtgtagggtagtttggattgccgagtcagactgacctctcaggtctaaatttaactta 87
Query: 361 attgtctgaa 370
||||||||||
Sbjct: 86 attgtctgaa 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_p10.g1 MSMg01no147_p10.g1 CHROMAT_FILE:
MSMg01no147_p10.g1 PHD_FILE: MSMg01no147_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:42 2005
(642 letters)
>mm_chrX_158440507_158441548
Length = 1042
Score = 1241 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 tttgcttctttgctatttgtatgtgcttctttacattaattctttgaataagatgctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgcttctttgctatttgtatgtgcttctttacattaattctttgaataagatgctctc 260
Query: 61 ttagtgtttcttctattgctgccatgaaacactacaataagaaagcaaattggggagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagtgtttcttctattgctgccatgaaacactacaataagaaagcaaattggggagaaa 320
Query: 121 agggtttaattaacttatacttccatgtcatagttcatcattgaaggaagtcaggacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggtttaattaacttatacttccatgtcatagttcatcattgaaggaagtcaggacaga 380
Query: 181 aactcaagcagggcaggaacctggaggcaggggctgattcagacaccaggggagagtggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactcaagcagggcaggaacctggaggcaggggctgattcagacaccaggggagagtggt 440
Query: 241 gcttactgggttatttctcatggtttgctcaatttgctttcctctagaacccaggaccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcttactgggttatttctcatggtttgctcaatttgctttcctctagaacccaggaccag 500
Query: 301 cagctcaggggtgacaccacccacaatgggctgcgccctccttcataaatcactaattaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagctcaggggtgacaccacccacaatgggctgcgccctccttcataaatcactaattaa 560
Query: 361 gaaaacgccctacaggcttgcctacagccccattatatgggagcattttcttaattgggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaacgccctacaggcttgcctacagccccattatatgggagcattttcttaattgggg 620
Query: 421 ttccctgctctcagatgactttagcttgtgtcaagttgacataaaactatccagcacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccctgctctcagatgactttagcttgtgtcaagttgacataaaactatccagcacaga 680
Query: 481 tgctaagaactggaaaatactcaacacagacagagatggccagtaatactcctaagggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgctaagaactggaaaatactcaacacagacagagatggccagtaatactcctaagggtt 740
Query: 541 atggatcaacctctatttagtctttgagcaggacccttccaaatattgttttgtcctaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atggatcaacctctatttagtctttgagcaggacccttccaaatattgttttgtcctaga 800
Query: 601 gaaaggacaaatgcctcttactcatagcaaataggatacaaa 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaaaggacaaatgcctcttactcatagcaaataggatacaaa 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
