Query= MSMg01no151_h21.b1 MSMg01no151_h21.b1 CHROMAT_FILE:
MSMg01no151_h21.b1 PHD_FILE: MSMg01no151_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:18 2005
(515 letters)
>mm_chrX_70643136_70644050
Length = 915
Score = 946 bits (489), Expect = 0.0
Identities = 504/509 (99%)
Strand = Plus / Minus
Query: 7 gaattcgccaacaattcaaaccaaagtttgatcccccaacaaataccaaataataggggg 66
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gaattcgccaacaatttaaaccaaagtttgatcccccaacaaataccaaataataggggg 656
Query: 67 tcctggagtgtgatcttcctgcctccggtccctgaagtcgagtcacaggatacattcaat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcctggagtgtgatcttcctgcctccggtccctgaagtcgagtcacaggatacattcaat 596
Query: 127 ttccctgcacaggcccatgggcaagctttggaaggggcttcaggtggggcaggggtctcg 186
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 595 ttccctgcacaggcccatgggcaagctttggaaggggtttcaggtggggcaggggtctcg 536
Query: 187 ggcaggtcaggggctgcagttgaggaaggagacatagatgagacaggggttgtgggcgag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggcaggtcaggggctgcagttgaggaaggagacatagatgagacaggggttgtgggcgag 476
Query: 247 gcaggaggaccagctgagaaaggagccacagatgaggcaagaatgcctggcgaggaagga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gcaggaggaccagctgagaaaggagccacagatgaggcaagaatgcctggcgaggaagga 416
Query: 307 gcaggtaaggccagaggaggagctgcagttcctgtgtccttcctacaggaggccggagct 366
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 415 gcaggtaaggccagaggaggagctgcagctcctgtgtccttcctacaggaggccggagct 356
Query: 367 gcagcagctcacgcaagactgtcagatgaggaaggagcagagggggagggggaaacaggt 426
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 355 gcagcagctcaagcaagactgtcagatgaggaaggagcagagggggaggggggaacaggt 296
Query: 427 gaggcaggaagagcagtggagggaggagctgcagctgaggcaagcttgtcggatgaggag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaggcaggaagagcagtggagggaggagctgcagctgaggcaagcttgtcggatgaggag 236
Query: 487 ggagcagaagatgaagaaggacttataga 515
|||||||||||||||||||||||||||||
Sbjct: 235 ggagcagaagatgaagaaggacttataga 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_h21.g1 MSMg01no151_h21.g1 CHROMAT_FILE:
MSMg01no151_h21.g1 PHD_FILE: MSMg01no151_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:18 2005
(655 letters)
>mm_chrX_70583733_70584788
Length = 1056
Score = 1187 bits (614), Expect = 0.0
Identities = 645/656 (98%), Gaps = 3/656 (0%)
Strand = Plus / Plus
Query: 1 tcactacatcaaactcttttttaaaattaagtttgtttacaaactctagggctattcata 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tcactacatcaaact--tttttaaaattaagtttgtttacaaactctagggctattcata 260
Query: 61 ttttgttatgcttctgggtttggaaaattgacttgtgtccattttatctaacttcttaaa 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttgttatgcttctgagtttggaaaattgacttgtgtccattttatctaacttcttaaa 320
Query: 121 tgatgggtgtgaaacttctcattatatgccctctttcttctcttaatacctacatgatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatgggtgtgaaacttctcattatatgccctctttcttctcttaatacctacatgatct 380
Query: 181 gtggtaatgtatttctcatttctgataccaatgattccatatatcacttttttcttattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggtaatgtatttctcatttctgataccaatgattccatatatcacttttttcttattt 440
Query: 241 aaccttccaagggttatgtatgatttgctcattttattcccagtttgtctttttctatta 300
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 aaccttccaagggttatgtatgatttgctcattttatccccagtttgtctttttctattt 500
Query: 301 cgttgatctctgctcttgtctctaatacctccttacttgtacttacttatgtttcactta 360
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttgatctctgctctcgtctctaatacctccttacttgtacttacttatgtttcactta 560
Query: 361 ctttgctattcttcttttctggtcttggtagtgagcttctgcctcataaaatgaaaaaaa 420
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttgctattctttttttctagtcttggtagtgagcttctgcctcataaaatgaaaaaaa 620
Query: 421 aa-gacaactataaatcaatatgctttatgaactcatacataaaacattctaaaaaacat 479
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagacaactataaatcaacatgctttatgaactcatacataaaacattctaaaaaacat 680
Query: 480 ttttagcaatgtgacttttaaagtgttaaagggttgcacaccatgacgaaagttgctcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttagcaatgtgacttttaaagtgttaaagggttgcacaccatgacgaaagttgctcaa 740
Query: 540 ggaaatacaaatcaaaatgtaattcaatttattaacaaatgaagaaaggaagaactggat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggaaatacaaatcaaaatgtaattcaatttattaacaaatgaagaaaggaagaactggat 800
Query: 600 aattagctcagtaattgcaacataaacatttgagaaactccaacatccactgcaga 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aattagctcagtaattgcaacataaacatttgagaaactccaacatccactgcaga 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|