XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGAGACCGCGGAATT
CATTAAAAATGACATGAAAACCAGTCTTCATTTACCTCTACCTGTTGTTA
AAATGGCAGATTCCCGAAATTTCTATGTATAGGCTCCAATTGCCTCAAAA
TACAGAGGCTCCTCTCAGCCTCAGAAGTGCTGGGACTTCAGACATAATTC
AGGCCAGGTTGTTGTTATTTATTTGTTGTTTTGGTTTAGGACAGTAAGCT
CTAACTCTATATCTCAGGATTGTCTGAAACCTCACCTGCAGCTTTGACTG
GCCTTGAAACTGAAGTCCCCAGCCTTACAAATGTACCTGGGCCTGAGGAA
ATATGTGTTCTTTATTTTTTATATTTAAAATTTGTTTGTTTGTTTGTTTG
TTTGTTTTTTATTCCTTTTTTCCTTGTTGAAGATTGAAACCAGAGCTTCT
TGCTGTAGCAGTAACATATTTGTCCAGCCAGAAAAACTTTATATTTTAGA
TCTGCTTTAGATTTGTATTATGATGAAAAATATTGAGGAGCTTGGTTATG
ATAAAAGCAACCATGATTTCATTTGGAGATTGAGATGCCAACACATTTAC
TCTAATTTATCAAAACCCTAGCAACAATGGGACCAAAATTTAGATCATCG
TGCGATTGCATATAAACCCACTTGAAGTCCCAGTTAAAGCCATCAATATT
AAGTGTGTGAGTGTGCGTGTGTGTGTTGTCCCCAGCN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTAGCACTGTTCCCAATTTCTAAT
GTATTATTTGCTTTTTTTGATATTTAATTTGTTGAGTTCTTTATATATTT
TGGATATCAACATTCTGTCAGATATAGGGTTGGTTAAGCCATTCTATAAG
CTGACATATTGTTCTATTGACAGTGCCCCATGCATTACAAAATATTTTCA
GTTTAATGAGGTTTCATTTATTAATTGTTGATCTTAGTGGATGAATTACT
AGAGTTCTGTTTAAGAAGTCATCTCCTGTGCCAAAGATTTCAAGGTTATT
CTCCACTTCCTCTTTTATCAGATTTAGTATATCAGGGTTTCTTGAACAGA
TCTTTGATCCATTTAGACTTGACTTTTGTGAAGGGAAATAGATGTGGATC
TACTTGTACTATTCTACAAGCAGATATCAATACTACCAGCATCATTTGTT
GAAAATGTTTCATCTATTCCATTGTAGAGTTTTGGCGTCTTGTTAAAATC
AAGTGTTAATAAGTATGGATTCACTTCTGTGTCTTCACATCAATTTATTG
ATCAACCTATCTGTATTTATGCCAATACCATGCAGTCTTTATCGCTTCTT
CTCTGTAGTACAGCTTGAAACTGGGGATAGGGAACTGGGGGAAGCCAACA
GACAGTTCCAGATTCCAGGAAACACGAG

Query= MSMg01no153_f20.b1 MSMg01no153_f20.b1 CHROMAT_FILE:
MSMg01no153_f20.b1 PHD_FILE: MSMg01no153_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:43 2005
         (581 letters)



>mm_chrX_53389990_53390971
          Length = 982

 Score =  464 bits (240), Expect = e-135
 Identities = 491/592 (82%), Gaps = 52/592 (8%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattcattaaaaatgaca---tgaaaaccagtcttcatttacctctacctgttgttaa 61
           ||||||||| ||||   |||   |||| |||||||||||||| |||||||||| | || |
Sbjct: 205 ggaattcatgaaaa---acaaactgaagaccagtcttcattttcctctacctggtattga 261

                                                                       
Query: 62  aatgg-cagattcccgaaatttctatgtataggctcc-aattgcctcaaaatacagaggc 119
           || || |||||| ||||||||| ||| |||||||||| || |||||| |||| |||||||
Sbjct: 262 aa-ggccagattgccgaaatttgtatatataggctccaaactgcctccaaatccagaggc 320

                                                                       
Query: 120 tcctctcagcctcagaagtgctgggacttcagacataattcaggccaggttgttgtt-at 178
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct: 321 tcctctcagcctcagaagtgctgggacttcagacataattcaggccaggctgt-gtttat 379

                                                                       
Query: 179 ttatttgttgttttggtttagg-acagtaagctctaactctatatctcaggattgtctg- 236
           |||| ||||||||||||||||| || || |||||||||||| ||||| |||| ||| || 
Sbjct: 380 ttatgtgttgttttggtttagggac-gtgagctctaactctgtatcttaggagtgt-tgg 437

                                                                       
Query: 237 aaacctcacctgcagctttgactggccttgaaactgaagtccccagccttacaaatgtac 296
           ||||||||  |||||||| ||||  ||||||||||||||||| |||||||||||||||||
Sbjct: 438 aaacctcatgtgcagcttggactcaccttgaaactgaagtcctcagccttacaaatgtac 497

                                                                       
Query: 297 ctggg--cctgaggaaatatg--tgttctttattttttatatttaaaatttgtttgtttg 352
              ||  || ||||||| |||  ||  ||||||||||||| |||||  ||| ||||   |
Sbjct: 498 a--ggaaccggaggaaacatgcctg--ctttattttttatttttaa--ttt-tttg---g 547

                                                                       
Query: 353 tttgtttgtttgttttttattccttttttccttgttgaagattgaaaccagagcttcttg 412
              |||| |||   |||||||            |||||||| |||| |||||||||||||
Sbjct: 548 ---gttt-ttt---ttttatt------------gttgaagactgaacccagagcttcttg 588

                                                                       
Query: 413 ctgtagcagtaacatatttgtccagccagaaa-aactttatattttagatctgctttaga 471
           |||||||||||| |||| |||||||||||  | ||||||||| ||||||| |||||||||
Sbjct: 589 ctgtagcagtaaaatatatgtccagccaggcagaactttataatttagatttgctttaga 648

                                                                       
Query: 472 tttgtattatgatgaaaaatattgaggagcttggttatgataaaagcaaccatgatttca 531
           ||||| ||  ||||||||| ||||||||||||| || |||||| || ||| ||||||| |
Sbjct: 649 tttgtgttgcgatgaaaaagattgaggagcttgcttgtgataataggaactatgatttta 708

                                                               
Query: 532 tttggagattgagatgcca-acacatttactctaatttat-caaaaccctag 581
           ||||||||||||||||| | |||||||| ||| ||||||| ||||| |||||
Sbjct: 709 tttggagattgagatgc-agacacatttgctcaaatttattcaaaaacctag 759


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 982
Length adjustment: 10
Effective length of query: 571
Effective length of database: 972
Effective search space:   555012
Effective search space used:   555012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)