Query= MSMg01no158_d24.b1 MSMg01no158_d24.b1 CHROMAT_FILE:
MSMg01no158_d24.b1 PHD_FILE: MSMg01no158_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:45 2005
(277 letters)
>mm_chrX_96107108_96107784
Length = 677
Score = 522 bits (270), Expect = e-153
Identities = 273/274 (99%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 5 gaattctttc-aattatcttgtatctactgagataatctcacgactttcctgtttaattc 63
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gaattctttcaaattatcttgtatctactgagataatctcacgactttcctgtttaattc 541
Query: 64 tagcaatgtggtgttattggaggatttttctctatgaatgtatgcttgcattcctgaagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tagcaatgtggtgttattggaggatttttctctatgaatgtatgcttgcattcctgaagt 481
Query: 124 agaatggttcggtaacacagggtagagtaggaatttgggggtggggtgggcatgttttac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 agaatggttcggtaacacagggtagagtaggaatttgggggtggggtgggcatgttttac 421
Query: 184 tggtaacttctgtcactggagttgtgcttctgtttctcggtgcttttctgctgccccacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tggtaacttctgtcactggagttgtgcttctgtttctcggtgcttttctgctgccccacc 361
Query: 244 attctttttatgagtgtgtgctgctctttcttag 277
||||||||||||||||||||||||||||||||||
Sbjct: 360 attctttttatgagtgtgtgctgctctttcttag 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_d24.g1 MSMg01no158_d24.g1 CHROMAT_FILE:
MSMg01no158_d24.g1 PHD_FILE: MSMg01no158_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:45 2005
(294 letters)
>mm_chrX_95998690_95999385
Length = 696
Score = 553 bits (286), Expect = e-162
Identities = 293/296 (98%), Gaps = 2/296 (0%)
Strand = Plus / Plus
Query: 1 aagacttacataagaaagctggatctagaagtcaggtggtctatctgcctctccactgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagacttacataagaaagctggatctagaagtcaggtggtctatctgcctctccactgcc 260
Query: 61 catcccatgacaacatagctactacctaggtattttacacactcatcagatggaggcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcccatgacaacatagctactacctaggtattttacacactcatcagatggaggcttg 320
Query: 121 aaatatgatactgtcgagcagaattcacagcatatttatgaagggttcaaaccccaaaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 aaatatgatactgtcgagcagaattcacagcatatttatgaagggttcaaacccaaaaaa 380
Query: 181 acaatgtgtttttttttt--gttaaataagtgtgattgcataaccagatgtatgctttga 238
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaatgtgttttttttttttgttaaataagtgtgattgcataaccagatgtatgctttga 440
Query: 239 tttttgtcaatgactttcaatttgcatttgtaagtattcaatggtggcaaaaaatt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttttgtcaatgactttcaatttgcatttgtaagtattcaatggtggcaaaaaatt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 696
Length adjustment: 9
Effective length of query: 285
Effective length of database: 687
Effective search space: 195795
Effective search space used: 195795
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
