Query= MSMg01no161_p16.b1 MSMg01no161_p16.b1 CHROMAT_FILE:
MSMg01no161_p16.b1 PHD_FILE: MSMg01no161_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:13 2005
(462 letters)
>mm_chrX_164311755_164312616
Length = 862
Score = 789 bits (408), Expect = 0.0
Identities = 436/452 (96%), Gaps = 13/452 (2%)
Strand = Plus / Minus
Query: 16 gaattcccttactcagaacatgatagggtgacctgcctagtatgatagcaaagggtagga 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gaattcccttactcagaacatgatagggtgacctgcctagtatgatagcaaagggtagga 593
Query: 76 accagatgagatcacacaagaacacatgtctcctcttttccagatagttcctcatgcagt 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 accagatgagatcacacaagaacacatgtctcctcttttccagatagttcctcatgcagt 533
Query: 136 gaagaaaatgggcttttgctgttcttggtccatagttgtctgcaggagaacagacaaaat 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gaagaaaatgggcttttgctgttcttggtccatagttgtctgcaggagaacagacaaaat 473
Query: 196 aacattgcaatatactaccttcccttttcattcacctatcatcccagaataagagaatag 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aacattgcaatatactaccttcccttttcattcacctatcatcccagaataagagaatag 413
Query: 256 aacagctacatagtctctaagactagcatagggtttcctatatgctcttatatcctctca 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aacagctacatagtctctaagactagcatagggtttcctatatgctcttatatcctctca 353
Query: 316 tttattttgcttttaaaaacataatcttttgatctattcttaaagaatttcatacttgtt 375
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 352 ttttttttgcttttaaaaacataatcttttgatctattcttaaagaatttcatacctgtt 293
Query: 376 tacaatgtattttgatatttaccccagctcctttcattcatctacttttttt-----ttc 430
||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 292 tacaatgtattttgatatttaccccagctcctttcattcatctac-----ttacccattc 238
Query: 431 ccccccaactttgtgtcattc---tttctttc 459
|| |||||||||||||||||| ||||||||
Sbjct: 237 ccacccaactttgtgtcattctcttttctttc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_p16.g1 MSMg01no161_p16.g1 CHROMAT_FILE:
MSMg01no161_p16.g1 PHD_FILE: MSMg01no161_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:13 2005
(262 letters)
>mm_chrX_164173119_164173780
Length = 662
Score = 445 bits (230), Expect = e-129
Identities = 254/262 (96%), Gaps = 2/262 (0%)
Strand = Plus / Plus
Query: 2 attttgatttcatacagcaggtagcagcttgttttcctatggccctttatgggcaggctt 61
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 202 attttgatttcatacagtaggtagcagcttgctttcctatggccctttatgggcaggctt 261
Query: 62 cggcaggtacactggaggaaacctgtgtctttcaggtcactaaaacatcaaagccatcca 121
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 262 tggcaggtacactggaggaaacctgtgtcattcaggtcactaaaacatcaaagccatcca 321
Query: 122 gacagaagcatcccgccaaacatttagaaaaatgtca-tgtctgttgtgacaaggaggtt 180
||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||
Sbjct: 322 gacagaagcatcctgccaaacatttagaaatatgtcact-tctgttgtgacaaggaggtt 380
Query: 181 atggaagtacaatgaagatgtaaaacatacctttaaatactaatgccaagccttttgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggaagtacaatgaagatgtaaaacatacctttaaatactaatgccaagccttttgaaa 440
Query: 241 gcacatcatctcaagtagacta 262
||||||||||||||||||||||
Sbjct: 441 gcacatcatctcaagtagacta 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 662
Length adjustment: 9
Effective length of query: 253
Effective length of database: 653
Effective search space: 165209
Effective search space used: 165209
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
