Query= MSMg01no168_c09.b1 MSMg01no168_c09.b1 CHROMAT_FILE:
MSMg01no168_c09.b1 PHD_FILE: MSMg01no168_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:10 2005
(418 letters)
>mm_chrX_124452342_124453159
Length = 818
Score = 748 bits (387), Expect = 0.0
Identities = 399/403 (99%)
Strand = Plus / Plus
Query: 16 gaattctctactcagaattaaaaccaatatttggcaaataggaattcataaaactaaaag 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattctctactcagaattaaaaccaatatttggcaaataggaattcataaaactaaaag 275
Query: 76 taaaatgctcttgtacagttaataaaataatcaactaaatgaaggagaagaaaagaatct 135
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 276 taaaatgctcttgtacagttaataaaataattaactaaatgaaggagaagaaaagaatct 335
Query: 136 cttgcacgtatacatccatttctgttgactgactccagaatgtgaagataagattttatt 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cttgcacgtatacatccatttctgttgactgactccagaatgtgaagataagattttatt 395
Query: 196 tctgaataattatactgtacacttcagaaatatgatttagaggaatgtagttgtcactga 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tctgaataattatactgtacacttcagaaatatgatttagaggaatgtagttgtcactga 455
Query: 256 tctggaagtattctttctaaagattagttctcatagcaccagtaggtactatgcaaaaat 315
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 456 tctggaagtattctttctaaagactagttctcatagcaccagtaggtactatgcaaaaat 515
Query: 316 atcaatagaaaaaaattgtgtgcgtgtgtgtaattatatcaaacaagcacacattttttt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 516 atcaatagaaaaaaattgtgtgcgtgtgtgtaattatatcaaacaagcacacacattttt 575
Query: 376 tatggacatttattaaatgtttttacactctctatacagccac 418
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tatggacatttattaaatgtttttacactctctatacagccac 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_c09.g1 MSMg01no168_c09.g1 CHROMAT_FILE:
MSMg01no168_c09.g1 PHD_FILE: MSMg01no168_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:10 2005
(375 letters)
>mm_chrX_124624350_124625130
Length = 781
Score = 638 bits (330), Expect = 0.0
Identities = 359/372 (96%), Gaps = 6/372 (1%)
Strand = Plus / Minus
Query: 10 aagccccttaccccataaaaccccctaattttcgagccttgtggccagcgcatccgttat 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aagccccttaccccataaaaccccctaattttcgagccttgtggccagcgcatccgttat 722
Query: 70 ctcctgtgtgggatgcatgtcggtccagagctctgtcattaaactacctcatgtaattac 129
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 721 ctcctgtgtgggatgcatgtcggtccagagctctgtcattaaactacctcacataattac 662
Query: 130 atcagggcagtctattcatgattctttgggtgcacaccaaatcgggaattgagtggggat 189
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcaggggagtctattcatgattctttgggtgcacaccaaatcgggaattgagtggggat 602
Query: 190 ttccccactaggttctatcaatagttaatagtggagggaaactataactgaaatggttac 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttccccactaggttctatcaatagttaatagtggagggaaactataactgaaatggttac 542
Query: 250 aacttctaaataaagttaaagaccctatatattgatatactcattagcagagataaca-- 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacttctaaataaagttaaagaccctatatattgatatactcattagcagagataacaag 482
Query: 308 ----atgttaggcaaagtttattttttaggaaaatatatggttaagtcctagatatggat 363
|||||||||||||||||| | |||||||||||||||| |||||||||||||||||
Sbjct: 481 cagtatgttaggcaaagtttatatagtaggaaaatatatggtcaagtcctagatatggat 422
Query: 364 tatattactaat 375
||||||||||||
Sbjct: 421 tatattactaat 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 781
Length adjustment: 9
Effective length of query: 366
Effective length of database: 772
Effective search space: 282552
Effective search space used: 282552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
