Query= MSMg01no169_h15.b1 MSMg01no169_h15.b1 CHROMAT_FILE:
MSMg01no169_h15.b1 PHD_FILE: MSMg01no169_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:10 2005
(316 letters)
>mm_chrX_60588555_60589270
Length = 716
Score = 576 bits (298), Expect = e-169
Identities = 304/306 (99%)
Strand = Plus / Minus
Query: 7 attccaagcatccagaaaagcctatgtgattgaagatacttttaaacatcacacaaacag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 attccaagcatccagaaaagcctatgtgattgaagatacttttaaacatcacacaaacag 453
Query: 67 gaacactgccatattagactcagaacaatttccaaatacaattgtcattattatttatgt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gaacactgccatattagactcagaacaatttccaaatacaattgtcattattatttatgt 393
Query: 127 tcattaacatcctttattttattcatatgattatatttttgtaaaactaaaatttacatt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcattaacatcctttattttattcatatgattatatttttgtaaaactaaaatttacatt 333
Query: 187 gtgtattatatcatgcattattgtaagcacaattaagtatattagtttatttatttccac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtgtattatatcatgcattattgtaagcacaattaagtatattagtttatttatttccac 273
Query: 247 ttctctgtggtgagaaagacagtgttatatccattaaacaaatgcccagtctcattttct 306
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 272 ttctctgtggtgagaaagacagtgttatatccattaaacaaatgcccagtttcattttca 213
Query: 307 caagga 312
||||||
Sbjct: 212 caagga 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_h15.g1 MSMg01no169_h15.g1 CHROMAT_FILE:
MSMg01no169_h15.g1 PHD_FILE: MSMg01no169_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:10 2005
(214 letters)
>mm_chrX_60447224_60447836
Length = 613
Score = 398 bits (206), Expect = e-115
Identities = 212/214 (99%), Gaps = 1/214 (0%)
Strand = Plus / Plus
Query: 1 gaattctgattgtttattttcactttatttgctagttatttttaaagaaaaagaaagggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattctgattgtttattttcactttatttgctagttatttttaaagaaaaagaaagggc 260
Query: 61 atgaagttgggcgttaagagagttggagaggatcatggaagggttgatagagtaaaaaaa 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaagttgggtgttaagagagttggagaggatcatggaagggttgatagagtaaaaaaa 320
Query: 121 gcactggtaatatactgtataaaatagtttttttttcagttaaaaatgagtacatattaa 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gcactggtaatatactgtataaaatagtttttttt-cagttaaaaatgagtacatattaa 379
Query: 181 aagaccaagtacaaagtcatttacagtggcatga 214
||||||||||||||||||||||||||||||||||
Sbjct: 380 aagaccaagtacaaagtcatttacagtggcatga 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 613
Length adjustment: 9
Effective length of query: 205
Effective length of database: 604
Effective search space: 123820
Effective search space used: 123820
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
