Query= MSMg01no173_e16.b1 MSMg01no173_e16.b1 CHROMAT_FILE:
MSMg01no173_e16.b1 PHD_FILE: MSMg01no173_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:56 2005
(315 letters)
>mm_chrX_101840719_101841431
Length = 713
Score = 503 bits (260), Expect = e-147
Identities = 298/314 (94%), Gaps = 9/314 (2%)
Strand = Plus / Minus
Query: 5 gaattcataaatatgcctacctggacttaaacattacataacatatacgtgtactaatca 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaattcataaataagtctacctggacttaaacattacataacatatacgtgtactaatca 383
Query: 65 ttaaatgttttccccac---tatgtgcaacttaatgactttcactttaaaaataagtaag 121
||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttaaatg---gcctcactattatgtgcaacttaatgactttcactttaaaaataagtaag 326
Query: 122 tagaagctctgccctagcctcagggcctgggccacagggttgccactacaataaacaaac 181
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 t--aagctctgccctagcctcagggcctgggccacagggttgccactacaataaacaaac 268
Query: 182 atatgatggagaagtttgaaagttagaaaaacagagcagtgtatgtgctatggagagaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atatgatggagaagtttgaaagttagaaaaacagagcagtgtatgtgctatggagagaag 208
Query: 242 cagtgtcttagtcagggtttctattcctgcacaaacatcatgaccaagaagcaagttggg 301
|||||||||||||| ||||||||||||||||||||||||||||||||||||| | || ||
Sbjct: 207 cagtgtcttagtcatggtttctattcctgcacaaacatcatgaccaagaagc-acttagg 149
Query: 302 gaggaaagggttta 315
||||||||||||||
Sbjct: 148 gaggaaagggttta 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 713
Length adjustment: 9
Effective length of query: 306
Effective length of database: 704
Effective search space: 215424
Effective search space used: 215424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_e16.g1 MSMg01no173_e16.g1 CHROMAT_FILE:
MSMg01no173_e16.g1 PHD_FILE: MSMg01no173_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:56 2005
(284 letters)
>mm_chrX_101737960_101738643
Length = 684
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 1 actatgtatccagagataaaactcagagagatgcctgccttagcctttcgagtgcttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actatgtatccagagataaaactcagagagatgcctgccttagcctttcgagtgcttgga 260
Query: 61 ttaaaggtatacacccctatatcgagcttcgtgacaagtttaaaaatatttttcccgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaggtatacacccctatatcgagcttcgtgacaagtttaaaaatatttttcccgttg 320
Query: 121 ttctctaaaactgtctttaaatattatcagaatatgactttgttgtttctataaaaccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctctaaaactgtctttaaatattatcagaatatgactttgttgtttctataaaaccaa 380
Query: 181 tagcctaacttatttggatagtgttccctagaaaaggtattcttttttttttaaacatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcctaacttatttggatagtgttccctagaaaaggtattcttttttttttaaacatta 440
Query: 241 aaaatatttttaaaaactcaatatatacacagacatatatatga 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatatttttaaaaactcaatatatacacagacatatatatga 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
