Query= MSMg01no173_l21.b1 MSMg01no173_l21.b1 CHROMAT_FILE:
MSMg01no173_l21.b1 PHD_FILE: MSMg01no173_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:28 2005
(323 letters)
>mm_chrX_138484643_138485362
Length = 720
Score = 586 bits (303), Expect = e-172
Identities = 314/319 (98%), Gaps = 3/319 (0%)
Strand = Plus / Plus
Query: 5 gaattccctgcagctcatgacaactggaatgttcagggatggaagtacataataaaaacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctgcagctcatgacaactggaatgttcagggatggaagtacataataaaaacc 264
Query: 65 catcccaaagtacttgatattgatggggttgcgagaatttcctcccttgtcctttagttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catcccaaagtacttgatattgatggggttgcgagaatttcctcccttgtcctttagttc 324
Query: 125 ctctttgttgtccctgctttatatagggtacccacccattgctcatcctgctttagagat 184
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 325 ctctttgttgtccctgctttatatagggtacccacccattactcatcctgctttagggat 384
Query: 185 ccatacctttaaatgcaagaactcctgctcatggccctgttcttacaacaactttgagct 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 ccatacctttaaatgcaagaactcctgctcatggccctgttcttacaac---tttgagct 441
Query: 245 ctgatttttgcttctgttttttcttaatatagtgacttccacatgaaggctcactaatat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctgatttttgcttctgttttttcttaatatagtgacttccacatgaaggctcactaatat 501
Query: 305 acaggaattgtcatactag 323
|||||||||||||||||||
Sbjct: 502 acaggaattgtcatactag 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 720
Length adjustment: 9
Effective length of query: 314
Effective length of database: 711
Effective search space: 223254
Effective search space used: 223254
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_l21.g1 MSMg01no173_l21.g1 CHROMAT_FILE:
MSMg01no173_l21.g1 PHD_FILE: MSMg01no173_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:28 2005
(240 letters)
>mm_chrX_138626103_138626742
Length = 640
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%)
Strand = Plus / Minus
Query: 1 gtgtcagaagaactacacgacctttatcagagcctgaagacagaggagcaggcgatgggg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtgtcagaagaactacatgacctttatcagagcctgaagacagaggagcaggcgatgggg 377
Query: 61 tggtagaggcaaggactgaggtgtcagcatttgtcatctcgagttatccatgcttgctga 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tggtagaggcaaggactgaggcgtcagcatttgtcatctcgagttatccatgcttgctga 317
Query: 121 ctttacatctttcactcattcttctttatctactttctcattgtggtcctcagacttgca 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctttacatcattcactcattcttctttatctactttctcattgtggtcctcagacttgca 257
Query: 181 ttcttactctctgagtcgaagtcaactgggtccctatctttggtttacttgatttt 236
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tccttactctctgagtcgaagtcaactgggtccctatctttggtttacttgatttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
