TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACTAGTGACCTTTTTTTTTTATATTTTACATGGTGTATTTTCCA
TTAACAAATAAAGAAATCTAATACTTGAAAAAAGGAAAATTAATTTTTAA
CACTATAATTATTATGAGTACTGAGTTATTCCTAGATTCCAATAAGAAGT
TTGGCTGAAGATAGCAATAATGTACTGCACAAAGGAAAAAAAGGTAGACA
AATTTTGAAGTTTAAACCATTCAGAAATGCTTGCTGTAAATATATGTTTA
ACATGACTTGCAGACTTATGTATTATATAGTGTGCATGTACACTGCAGCA
TCATCTCATCTCACTAATATGTATACTTTTTATGAGCTTCTGTTTCAGTT
AAAAGTGCATTTAATAGGAAAGACAGAATAAAGTAAATAAGTGAAACATG
CTGGCAGAATTTGTTATCCATATGGAGAAATTGCATACATATTCCTATTT
CACTTCATGTACAAAAATAAATTCAAAATGTTATAATACTATAAATGTCA
AAACCCAAGTGCATTATTATTAGAAGGAAATTTGTGTATCTGTCTTTAAG
CAAGAAAATACCTACAGATGTCATAAGTGAAATATTCACAGATTTTTCTA
GGTAAATGTTTAAAACTCATATCCTTCTAAAATAGAATGAAAGTCATGTA
TAGTATTGAAATACAA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGGCCCATACCTAAACATGATAA
AAGCAATCTACAGCAAATAAGTAGACAACATCAAAGTAAATGGTGAGAAG
CTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTC
TCCCTACCTTTTCAACATAGTACTTGAAGCATTAGCCAGAGCAATTTGAC
AACAAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATA
TCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTC
TACCAGAGAACTCCTAATCCTGATAAACAGCTTCGGTGAAGTAGCTGGAT
ATAAAATAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAA
CAGGCTGAGAAAGAAATTAGGGAAACAGCACCCTTCTCAATAGTCACAAA
TAATATAAAATATCTTGGCATGACTTTAAGGAAGTGAAAGATCCATATGA
TAAAAACTTCAAATCTCTGAAGAAAGAAATTATAGAAGATCTCAGAAGAT
GGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATG
GCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAAT
TCCAGCTCAATTCTTC

Query= MSMg01no177_i02.b1 MSMg01no177_i02.b1 CHROMAT_FILE:
MSMg01no177_i02.b1 PHD_FILE: MSMg01no177_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:05 2005
         (609 letters)



>mm_chrX_125584493_125585499
          Length = 1007

 Score = 1104 bits (571), Expect = 0.0
 Identities = 584/591 (98%), Gaps = 6/591 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactagt--gaccttttttttttatattttacatggtgtattttccattaacaaa 62
           ||||||||||||  ||    ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 587 gaattcactagtgaga----tttttttaatattttacatggtgtattttccattaacaaa 532

                                                                       
Query: 63  taaagaaatctaatacttgaaaaaaggaaaattaatttttaacactataattattatgag 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 taaagaaatctaatacttgaaaaaaggaaaattaatttttaacactataattattatgag 472

                                                                       
Query: 123 tactgagttattcctagattccaataagaagtttggctgaagatagcaataatgtactgc 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tactgagttattcctagattccaataagaagtttggctgaagatagcaataatgtactgc 412

                                                                       
Query: 183 acaaaggaaaaaaaggtagacaaattttgaagtttaaaccattcagaaatgcttgctgta 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 acaaaggaaaaaaaggtagacaaattttgaagtttaaaccattcagaaatgcttgctgta 352

                                                                       
Query: 243 aatatatgtttaacatgacttgcagacttatgtattatatagtgtgcatgtacactgcag 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aatatatgtttaacatgacttgcagacttatgtattatatagtgtgcatgtacactgcag 292

                                                                       
Query: 303 catcatctcatctcactaatatgtatactttttatgagcttctgtttcagttaaaagtgc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 catcatctcatctcactaatatgtatactttttatgagcttctgtttcagttaaaagtgc 232

                                                                       
Query: 363 atttaataggaaagacagaataaagtaaataagtgaaacatgctggcagaatttgttatc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atttaataggaaagacagaataaagtaaataagtgaaacatgctggcagaatttgttatc 172

                                                                       
Query: 423 catatggagaaattgcatacatattcctatttcacttcatgtacaaaaataaattcaaaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 catatggagaaattgcatacatattcctatttcacttcatgtacaaaaataaattcaaaa 112

                                                                       
Query: 483 tgttataatactataaatgtcaaaacccaagtgcattattattagaaggaaatttgtgta 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tgttataatactataaatgtcaaaacccaagtgcattattattagaaggaaatttgtgta 52

                                                              
Query: 543 tctgtctttaagcaagaaaatacctacagatgtcataagtgaaatattcac 593
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  tctgtctttaagcaagaaaatacctacagatgtcataagtgaaatattcac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1007
Length adjustment: 10
Effective length of query: 599
Effective length of database: 997
Effective search space:   597203
Effective search space used:   597203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)