TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTTATTTCATCCTCATTTGGATTTAACTCAAGTTCAGAAGTATA
TAATCACACTGAATTTCATTTTCTTAAAAATATTTTTTCCAATTACCCAT
GGCAATTAATAAGTGACTGTTCAGGCTACAGACTGTGCTAGGTTCAATCA
TCTATGAAGGAGATTGGCACAGATGACTAATTGGAATAATATGATTTGGT
CTCTAGAATTTTAGGTAACGATTATCAAGACAATGAAATAATTATCAAAA
ATTAGATGGTATTGGTTATATAAAAAAGGGAAATACTATTCCACAACAGG
TTACATTTTAGCAAAAATATGAGCGAGTAAAAATAATAAGCAAGAAGAGA
AAAAAAGAGAGATGGTTAAGTCATGTATACCGAAACAACCAAGTCCTATA
ATGAGGATACATAGCCCCAAGTGGAAAAAAATGTTAGTCCTAAAAACAGT
CTGGTTCCTGACAACATTTAATTCTCTTTGTTTTGCTGCATCAAGTGAAA
CAATTTTAGCCCTTGCCAATATGCATATAGCAGTGGAGAAAGAAAGAAAA
ATACTATTGGAAAACCAAAAACTAACTCATTATTTAAAGAAAGTTTGACT
TATAGTAAGGGACTAGCTCATGTTGCTTATGGTTTCTCCTTATGGGTGTG
GCTT

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAA
GTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTG
CTAAA

Query= MSMg01no178_i20.b1 MSMg01no178_i20.b1 CHROMAT_FILE:
MSMg01no178_i20.b1 PHD_FILE: MSMg01no178_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:22 2005
         (649 letters)



>mm_chrX_154434983_154436031
          Length = 1049

 Score = 1208 bits (625), Expect = 0.0
 Identities = 640/645 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttatttcatcctcatttggatttaactcaagttcagaagtatataatcacact 64
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttatttcattatcatttggatttaactcaagttcagaagtatataatcacact 264

                                                                       
Query: 65  gaatttcattttcttaaaaatattttttccaattacccatggcaattaataagtgactgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaatttcattttcttaaaaatattttttccaattacccatggcaattaataagtgactgt 324

                                                                       
Query: 125 tcaggctacagactgtgctaggttcaatcatctatgaaggagattggcacagatgactaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaggctacagactgtgctaggttcaatcatctatgaaggagattggcacagatgactaa 384

                                                                       
Query: 185 ttggaataatatgatttggtctctagaattttaggtaacgattatcaagacaatgaaata 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 ttggaataatatgatttggtctctagaattttaggtaacgattatcaagacaatgaaaca 444

                                                                       
Query: 245 attatcaaaaattagatggtattggttatataaaaaagggaaatactattccacaacagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attatcaaaaattagatggtattggttatataaaaaagggaaatactattccacaacagg 504

                                                                       
Query: 305 ttacattttagcaaaaatatgagcgagtaaaaataataagcaagaagagaaaaaaagaga 364
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttacattttagcaaaaatatgagtgagtaaaaataataagcaagaagagaaaaaaagaga 564

                                                                       
Query: 365 gatggttaagtcatgtataccgaaacaaccaagtcctataatgaggatacatagccccaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gatggttaagtcatgtataccgaaacaaccaagtcctataatgaggatacatagccccaa 624

                                                                       
Query: 425 gtggaaaaaaatgttagtcctaaaaacagtctggttcctgacaacatttaattctctttg 484
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 625 gtggaaaaaaatgttagtcctaaaaacagtttggttcctgacaacatttaattctctttg 684

                                                                       
Query: 485 ttttgctgcatcaagtgaaacaattttagcccttgccaatatgcatatagcagtggagaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttttgctgcatcaagtgaaacaattttagcccttgccaatatgcatatagcagtggagaa 744

                                                                       
Query: 545 agaaagaaaaatactattggaaaaccaaaaactaactcattatttaaagaaagtttgact 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agaaagaaaaatactattggaaaaccaaaaactaactcattatttaaagaaagtttgact 804

                                                        
Query: 605 tatagtaagggactagctcatgttgcttatggtttctccttatgg 649
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tatagtaagggactagctcatgttgcttatggtttctccttatgg 849


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)