Query= MSMg01no179_n08.b1 MSMg01no179_n08.b1 CHROMAT_FILE:
MSMg01no179_n08.b1 PHD_FILE: MSMg01no179_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:56 2005
(234 letters)
>mm_chrX_7159653_7160286
Length = 634
Score = 414 bits (214), Expect = e-120
Identities = 227/232 (97%), Gaps = 2/232 (0%)
Strand = Plus / Minus
Query: 5 gaattctgagatctgctcttggatttaactctgacacaacatctctgtgaggcctggggg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gaattctgagatctgctcttggatttaactctgacacaacatctctgtgaggcctggggg 352
Query: 65 tgggggctgctcatctctgagcccagtttgcccttctagactggggagggaagagtacga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgggggctgctcatctctgagcccagtttgcccttctagactggggagggaagagtacga 292
Query: 125 ggtggaagaaggccagcatctttctgtctcgtggctggggtaaatcttatggagctatat 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggtggaggaaggccagcatctttctgtctcgtggctggggtaaatcttatggagctatat 232
Query: 185 atccgtatgtatgtatggtatggtatgatatatatatat--atatatatata 234
| |||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 231 agccgtatgtatgtatggtatggtatgagatatatatattgatatatatata 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no179_n08.g1 MSMg01no179_n08.g1 CHROMAT_FILE:
MSMg01no179_n08.g1 PHD_FILE: MSMg01no179_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:56 2005
(287 letters)
>mm_chrX_7069163_7069849
Length = 687
Score = 514 bits (266), Expect = e-150
Identities = 281/286 (98%)
Strand = Plus / Plus
Query: 1 aggcagagactccctcctagaccagagaccacactggcagccagaaccgcagataggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggcagagactccctcctagaccagagaccacactggcagccagaaccgcagataggctg 260
Query: 61 tctaccagcgggcttcctacactcacttagtgccccaagcccccactcccctcctcatta 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaccagcgggcttcctacactcacttagtgccccaagcccccactcccctcctcatta 320
Query: 121 ttgtatctcaccccctcaacttgggcagagacccccctgcttcaccaaaggaaaaactag 180
|||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 321 ttgtgtctcactccctcaacttgggcagagacccccctgcttcaccaaaggcaaagctag 380
Query: 181 ccactagaggttcagcccccaagttggacagagaatccctactggaggtcatgccggcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccactagaggttcagcccccaagttggacagagaatccctactggaggtcatgccggcca 440
Query: 241 ccagaaacccaaaccacaaaggccagaagacgacagagtaaacaga 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagaaacccaaaccacaaaggccagaagacgacagagtaaacaga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
