Query= MSMg01no180_a23.b1 MSMg01no180_a23.b1 CHROMAT_FILE:
MSMg01no180_a23.b1 PHD_FILE: MSMg01no180_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:13 2005
(372 letters)
>mm_chrX_9762536_9763307
Length = 772
Score = 675 bits (349), Expect = 0.0
Identities = 364/369 (98%)
Strand = Plus / Minus
Query: 4 ggaattcacatgcatttgtcattggagaaaggcatgggaagaaaaatattcattttatag 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggaattcacatgcatttgttattggagaaaggcatgggaagaaaaatattcattttatag 513
Query: 64 gttagaagagacgtattcgcagtgaatatttttctttggtctattgggtttttacctgat 123
||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 512 gttagaagagatatatttgcagtgaatatttttctttggtctaatgggtttttacctgat 453
Query: 124 atgttccagtccagttgaccctttaaggtaatcatttctgggtcattgtggattgttggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgttccagtccagttgaccctttaaggtaatcatttctgggtcattgtggattgttggg 393
Query: 184 aagtcagactataagtaggaagaacatgtgcaatttagaaggtaaatttggaaggactaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aagtcagactataagtaggaagaacatgtgcaatttagaaggtaaatttggaaggactaa 333
Query: 244 tattcgtcggtaacaatgatctcaggaaattagtatctgagacagtggtattttgaatgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tattcgtcggtaacaatgatctcaggaaattagtatctgagacagtggtattttgaatgc 273
Query: 304 caaatatcagtggtcagagctcaaaccaaaagcggataagcggaggtgagccagtggtac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 caaatatcagtggtcagagctcaaaccaaaagcggataagcggaggtgagccagtggtac 213
Query: 364 aggagagca 372
|||||||||
Sbjct: 212 aggagagca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_a23.g1 MSMg01no180_a23.g1 CHROMAT_FILE:
MSMg01no180_a23.g1 PHD_FILE: MSMg01no180_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:13 2005
(401 letters)
>mm_chrX_9686081_9686880
Length = 800
Score = 646 bits (334), Expect = 0.0
Identities = 387/420 (92%), Gaps = 27/420 (6%)
Strand = Plus / Plus
Query: 1 tctgcccgtctaactaaacatgtagagactgggcttcttcttcttcttctt--------- 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tctgcccgtctaactaaacatgtagagactgggcttcttcttcttcttcttcttcttctt 248
Query: 52 -----ttttttaaaatcttattcaatgagaagtgagtgcattgtgggctagcagtacgcc 106
||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 249 ttttttttttta---tcttattcaatgagaagtgagtgcattgtgggctagcagtactcc 305
Query: 107 tccagccaacaatgaaagagcagataccagtgactttctctggcgtagcccttcattatt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tccagccaacaatgaaagagcagataccagtgactttctctggcgtagcccttcattatt 365
Query: 167 tgcagaaaagacacagttttgtcactcaatacttgagagtaaattacttaatagaaaaga 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgcagaaaagacacagttttgtcactcaatacttgagagtaaattacttaatagaaaaga 425
Query: 227 aaatcagtgtaagacccctcagagatgctgaggctatacagatattagaatatattacta 286
|||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 426 aaatcagtgtaagaaccctcagagatgctgaggctatacagatgttagaacatattacta 485
Query: 287 gtgagaaggtaaaaagatgtagtctttctgggaaaagagttcggtagtttcctagatg-- 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtgagaaggtaaaaagatgtagtctttctgggaaaagagttcggtagtttcctagatgtt 545
Query: 345 ---ccccccccacagtgagcatatgacctggatgttccattcccaggtaactggccaaga 401
|| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgtcct-----agagtgagcatatgacctggatgttccattcccaggtaactggccaaga 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 800
Length adjustment: 9
Effective length of query: 392
Effective length of database: 791
Effective search space: 310072
Effective search space used: 310072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
