ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATAATAATGTTCAGTAAGATTTATGATGTGCTATTGGATTCCATTTG
CTAGCATTTTGTTGAAAATTATCCTGTCTTTGTTCAATGTGAATATTATT
GTATAGCTTTTGTTGTTGTTATGTCTCTATCTGGTTTTGGTATCTAGGTA
AGGCTAGCTTCAGATTAATTTGAAATGGATTAAATATCTAAACATATGAG
CTAAAAATATGAAAGAAACCTTTGAGAACATTTATATTTGTGTAGTCAAT
AGTGTTTTGGTTTTTGTTTTTACATAACCCCCAAAGGAAACAATAGCTAG
AACAGACAAGTAATATCTACCAAGCTAGGGGGGAAAACCTGCCTAGCAAA
GGAAATAATTGAATGAGAACAACCTATAGAATAAAAATATTTGATATTTG
TCCATATGATAAATATTAATGCTATCCAGTATAAAGGTCTTGGAAAAGCT
AGTAAGAATACCCAATAATTAAAATTTAAAAGGGCAAAATAGGCTAGAGA
GATGGCTCAGTTATTAAGTGCACTGCCTACTATTTCAGTGGATTCATCTT
TGATTCCCAGCACCCATATGGTGTTTCACAACAATCTAACTCCAGTTCCA
TGGGATCTAGATGCAGGGGGCACCAGACATGCATATTGGGCACAGACTTT
CATTTAGGCAAAACACCTATGAACCTAAAGTTGTTGN

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACACGGGACATGATACATTCCCACAGTT
CAAAGGCTGAAGCAGGAGGACCCTAAATTTGAGGCCAGCTTTGGTTACAT
AGAAAGACCATTTCTAAGGGTATAGGAACTCCACAGGAAGACCAACAGAG
TCAACTAACCTGGACCCTGGGCTCTCAGAGACTGAACCACCAACCAAAGA
GCATGCACAGGCTGGACCTAGGCCTCCCCGCACATATGTAGCAGATGTGC
CGCTTGGTCTTCATGCAGATCCCAACAACTGGAGCAGGGGCTATCCCAAA
AGCTGTTCCCTGTCTATGTGATATATTCTACTAGCTGGGCTGCCTTGTCT
GGCCTCAGTGGAAGAAAAAGCAGCTAGCCTTGAAGAGACTTGAAGTGCCA
GGGTGAGGGGATACCCAGGAGGGCCCCTATTCACTCAGAGAAGGGGGAAA
AGGATCGTAGGAGGGGGTGACTGGGACGGGGACACTGAACTGGAATAAAT
AAAAACATTAAATTAAATTAAAGAAAAGAAAAACTCTTTCTAAAAGCCAG
TGACAAAAATGGAGTCATTTGTGGCAGCCATTTCAAAAGGAGCTAAAACC
AAAACATTAAGAATAAGCCATTCTTATGCATAGTTATTTGTAAAGAGAAC
AAAGAGATGACCCTTTAAATAAAATTTC

Query= MSMg01no183_i06.b1 MSMg01no183_i06.b1 CHROMAT_FILE:
MSMg01no183_i06.b1 PHD_FILE: MSMg01no183_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:33 2005
         (615 letters)



>mm_chrX_149746314_149747328
          Length = 1015

 Score = 1137 bits (588), Expect = 0.0
 Identities = 606/612 (99%), Gaps = 2/612 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcataataatg-ttcagtaagatttatgatgtgctattggattccatttgctagca 63
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcataataatgatt-agtaagatttatgatgtgctattggattccatttgctagca 263

                                                                       
Query: 64  ttttgttgaaaattatcctgtctttgttcaatgtgaatattattgtatagcttttgttgt 123
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttttgttgaaaattatagtgtctttgttcaatgtgaatattattgtatagcttttgttgt 323

                                                                       
Query: 124 tgttatgtctctatctggttttggtatctaggtaaggctagcttcagattaatttgaaat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgttatgtctctatctggttttggtatctaggtaaggctagcttcagattaatttgaaat 383

                                                                       
Query: 184 ggattaaatatctaaacatatgagctaaaaatatgaaagaaacctttgagaacatttata 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggattaaatatctaaacatatgagctaaaaatatgaaagaaacctttgagaacatttata 443

                                                                       
Query: 244 tttgtgtagtcaatagtgttttggtttttgtttttacataacccccaaaggaaacaatag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttgtgtagtcaatagtgttttggtttttgtttttacataacccccaaaggaaacaatag 503

                                                                       
Query: 304 ctagaacagacaagtaatatctaccaagctaggggggaaaacctgcctagcaaaggaaat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctagaacagacaagtaatatctaccaagctaggggggaaaacctgcctagcaaaggaaat 563

                                                                       
Query: 364 aattgaatgagaacaacctatagaataaaaatatttgatatttgtccatatgataaatat 423
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aattgaatgagaagaacctatagaataaaaatatttgatatttgtccatatgataaatat 623

                                                                       
Query: 424 taatgctatccagtataaaggtcttggaaaagctagtaagaatacccaataattaaaatt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taatgctatccagtataaaggtcttggaaaagctagtaagaatacccaataattaaaatt 683

                                                                       
Query: 484 taaaagggcaaaataggctagagagatggctcagttattaagtgcactgcctactatttc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taaaagggcaaaataggctagagagatggctcagttattaagtgcactgcctactatttc 743

                                                                       
Query: 544 agtggattcatctttgattcccagcacccatatggtgtttcacaacaatctaactccagt 603
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 744 agtggattcatctttgattcccagcacccatatggtggttcacaacaatctaactccagt 803

                       
Query: 604 tccatgggatct 615
           ||||||||||||
Sbjct: 804 tccatgggatct 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)