ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGCATTATACCATTTGTGCAGCATGCATGAGCGCCACCTCAAGTACT
GCAAAGAAAAAAAAAGTAAAATCAATACAAAGAGGCTCAAAACTGAGCTG
GAGAATGACGAGAGGGCTTGGTGAGTAAAGTGCTTGCCGTGAGTGTTGAC
GATCTGCGTTTGATACGCAGAACCCACATACAAGTATAAGGAAAGAGCTG
ACTGGACAAAGCTGCTCTCGGCTCTCCACACACAAACTGTGGTGCATGCA
CACCCACACATATGCAGACACAATCATGATTAAGTTTTAAAAACTGAGTC
AGACATTTCAGATGTGCTCTTACTGTAAACATAACTCAATAGAAAGAAAA
TAAACAGTCGAAGACATTTCATTATTAAAGAAAGAAGCCAACCACTGATA
TGGAGCACATTTTCTTTCTGTAAAATAAGGTACAGCAGGCCAGTGGATGA
CTGAGCAGGCAAAGACTCTTAACTCCCAGCCTGATGACCTCACAGGATGG
AAGAAGAAAACAGACTCTTGAAACTTGGCCTTTGACAGCTACACGTATTG
TTATACACACACAAACACACACGCACACAAAACAAATAAATGTCAAAACG
TTAGTTTAAAGGAATAGCGGAGGAGACAATAAAGTCCAGAAACGTAATCT
TTCTCCTTATCTGAGAACTGCTATCTAATTCATTTCT

TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGA
AGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATACCACCTCACACCAGTCAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCT
GTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCAGAAGATCCAGC
AATACCTCTCTTGTTTATATATCCCCACACATGTCCCAACTGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGACTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGGAACTCACATAATATGTACTCACTGATAAGTG
GATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCCTA
AACACATGAAACTCAAGGAAAATGAAGACTGA

Query= MSMg01no183_m06.b1 MSMg01no183_m06.b1 CHROMAT_FILE:
MSMg01no183_m06.b1 PHD_FILE: MSMg01no183_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:52 2005
         (687 letters)



>mm_chrX_130884009_130885096
          Length = 1088

 Score = 1210 bits (626), Expect = 0.0
 Identities = 671/686 (97%), Gaps = 2/686 (0%)
 Strand = Plus / Minus

                                                                        
Query: 4    ggaattcagcattataccatttgtgcagcatgcatgagcgccacctcaagtactgc-aaa 62
            |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1076 ggaattcagcattagaccatttgtgcagcatgcatgagcaccacctcaagtactgcaaaa 1017

                                                                        
Query: 63   gaaaaaaaaagtaaaatcaatacaaagaggctcaaaactgagctggagaatgacgagagg 122
             |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1016 aaaaaaaaaagtaaaataaatacaaagagtctcaaaactgagctggagaatgacgagagg 957

                                                                        
Query: 123  gcttggtgagtaaagtgcttgccgtgagtgttgacgatctgcgtttgatacgcagaaccc 182
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 956  gcttggtgagtaaagtgcttgccgtgagtgttgacgacctgcgtttgatacgcagaaccc 897

                                                                        
Query: 183  acatacaagtataaggaaagagctgactggacaaagctgctctcggctctccacacacaa 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  acatacaagtataaggaaagagctgactggacaaagctgctctcggctctccacacacaa 837

                                                                        
Query: 243  actgtggtgcatgcacacccacacatatgcagacacaatcatgattaagttttaaaaact 302
            ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 836  actgtggtgtatgcacacccacacatatgcagacacaatcatgataaagttttaaaaact 777

                                                                        
Query: 303  gagtcagacatttcagatgtgctcttactgtaaacataactcaatagaaagaaaataaac 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 776  gagtcagacatttcagatgtgctcttactgtaaacataactcaatagaaagaaaacaaac 717

                                                                        
Query: 363  agtcgaagacatttcattattaaagaaagaagccaaccactgatatggagcacattttct 422
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 716  agtcgaagacatttcattattaaagaaagaagccaaccactgatgtggagcacattttct 657

                                                                        
Query: 423  ttctgtaaaataaggtacagcaggccagt-ggatgactgagcaggcaaagactcttaact 481
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 656  ttctgtaaaataaggtacagcaggccagtgggatgactgagcaggcaaagactcttaact 597

                                                                        
Query: 482  cccagcctgatgacctcacaggatggaagaagaaaacagactcttgaaacttggcctttg 541
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  cccagcctgatgacgtcacaggatggaagaagaaaacagactcttgaaacttggcctttg 537

                                                                        
Query: 542  acagctacacgtattgttatacacacacaaacacacacgcacacaaaacaaataaatgtc 601
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 536  acagctacacgtattgttatacacacacaaacacacatgcacacaaaacaaataaatgtc 477

                                                                        
Query: 602  aaaacgttagtttaaaggaatagcggaggagacaataaagtccagaaacgtaatctttct 661
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 476  aaaacgttagtttaaaggaatagcggagcagacaataaagtccagaaacgtaatctttct 417

                                      
Query: 662  ccttatctgagaactgctatctaatt 687
            ||||||||||||||||||||||||||
Sbjct: 416  ccttatctgagaactgctatctaatt 391


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1088
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1078
Effective search space:   729806
Effective search space used:   729806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)