Query= MSMg01no189_j21.b1 MSMg01no189_j21.b1 CHROMAT_FILE:
MSMg01no189_j21.b1 PHD_FILE: MSMg01no189_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:38 2005
(325 letters)
>mm_chrX_12211166_12211890
Length = 725
Score = 590 bits (305), Expect = e-173
Identities = 314/317 (99%)
Strand = Plus / Plus
Query: 5 gaattccaacttaaagggccagtaaatatcttcaacaaaattatagaagaaagcttccta 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattccaacttaaagggccagtaaatatcttcaacaaaattatagaagaaagcttccca 264
Query: 65 aacctaaagaaagagatgcccatgaacataaaagaagcctacagaactccaaatagacta 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatctaaagaaagagatgcccatgaacataaaagaagcctacagaactccaaatagacta 324
Query: 125 gtccagaaaagaaattcttcctgtcacataatagtcaagaatgactttatcttggtaaat 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtccggaaaagaaattcttcctgtcacataatagtcaagaatgactttatcttggtaaat 384
Query: 185 gacaccacagtgacccagtgcccaaaaagaagttacattgacataacctcaacatacctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacaccacagtgacccagtgcccaaaaagaagttacattgacataacctcaacatacctt 444
Query: 245 ttgtagggacatgaaacccacaaatgcatgaaaatatgtccattttcttcaggatgtttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgtagggacatgaaacccacaaatgcatgaaaatatgtccattttcttcaggatgtttt 504
Query: 305 ttatatggaagactttg 321
|||||||||||||||||
Sbjct: 505 ttatatggaagactttg 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_j21.g1 MSMg01no189_j21.g1 CHROMAT_FILE:
MSMg01no189_j21.g1 PHD_FILE: MSMg01no189_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:38 2005
(279 letters)
>mm_chrX_12306090_12306766
Length = 677
Score = 520 bits (269), Expect = e-152
Identities = 276/279 (98%), Gaps = 2/279 (0%)
Strand = Plus / Minus
Query: 1 ctgaaacaggaggattgctgagatggaggcttgcaaggcttccattgtgagtggctacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctgaaacaggaggattgctgagatggaggcttgcaaggcttccattgtgagtggctacac 418
Query: 61 agttagaacccatcttaaaacacatgtgagtgaaataatgtgcttttctcatcacgccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agttagaacccatcttaaaacacatgtgagtgaaataatgtgcttttctcatcacgccat 358
Query: 121 aatcaggcctggccctgtgtcagtctgcaagacgagtagggtggtcacagatgacttttt 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 357 aatcaggcctggccctgtgtcagtctgcaagacgagtagggtggtcacggatgacttttt 298
Query: 181 tcttacttgtttgtggccagaggactttgcttttgtaggctccaccagtctgagcccggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcttacttgtttgtggccagaggactttgcttttgtaggctccaccagtctgagcccggt 238
Query: 241 gtgctttttttagtgctttgagttcctaggttgcctatt 279
|||| |||||||||||||||||||||||||||||||||
Sbjct: 237 gtgc--tttttagtgctttgagttcctaggttgcctatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 677
Length adjustment: 9
Effective length of query: 270
Effective length of database: 668
Effective search space: 180360
Effective search space used: 180360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
