CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGAAAGTGTACCGGGCGTTACCTCATCTATTATTTAGTATCTGGA
TATCAAACTTTACTCTTTAACCTACTGGGGTTCTATCTAAGTTCATGCAT
GTGATCCAAAACATCTACCAATAAATCCTTATTAGTACAGACTACGTAGT
TATTCCTGAGGCCCATATAAACAAAGACACTATTGTCAAACAAAAAGTTC
AAGGGATAAAGAGACTGCTTGCCAAAAGCCAAAAGCCAAAAAGCCAGGCC
TCTCTTTGGGTAACATTAATCCTTAAGGACTTTCCTTGGACAATGAAGGG
TCCATCAACTTAGAGCCCAAATAAATACCAGTGTTTTCCCCAGATTTTTA
CTGCAGTATTCATTCTTTGTGCCTCAGGAAGATGCTCAGAAGATCCCTAG
AAGAAACATGTTGTTACTGGAAAGTCATAAAGGGTTACATCAAAAATTCT
ATGTAGTAATGATATATGGATTTAAAGCAGATACAAGACAGTGATCCTAT
ATGTTACAAATTCTTAGAGGATCTTTATCCTTAAAGCCAGAGGGATAACC
ATTTGGGAGATTATTCAGCAAGGTAATAATGCTTTCTGTCATTCCTATGG
ATGATACAGCACTCATACTTGAAGAGCATCAGAGCCATGGTAACATTCAA
TGCTCTAGCTAGTATCCATGTTCCACCAAGTGTGAGACACAAN

TTACTTAANNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGGATGGCAATA
CCTCTTTTAGTTCTTTTATTATTAATGGTTATTTCAGCTATACTCAGAAG
TTGAGAATTGTCCTTTGAAAGTCTGTAAATAATTGTATTTGAATTTTTAT
GGAGATTGCATTGAATCTGTAGATTGGTTTTGGTAGAGTGGACATTTTTA
ATGTTACTCCTGTCGATTAAGCAGCATGGAAGATCTGTCCATCTTCTGAT
ATCTTCTTCAATTTCTTTCTCCAAAGACTTGATGTTTTTTATCATACAAG
ACTTTTACTTTCTTGATTAAAGTTACCCCAAGCATATTTAATAACATTTG
AGGCTGTTGTGAAAGGTGTTGTTTTAACCCCCCCCTTGTTACTCCATTTG
TCATTCGCATACTGGAAAGCTTCCCATTTCCGCCTTATTAATTCGATTTC
CGCTATTCAGCCTCAACGGATATCTTCTGCCCTGGTTTATTCCCTTTTGT
CCTTTTCTTACCCCTATCCCCCCTTCCTTGTTCTTTTTATTTACTTCCGA
ATAACGCTTCCCTTACTATTTTCACCCTCACGCCTATCCCCCTTCCTTCT
ATTTCCCTCTCCCTTTTTCCCCCCCACCCTTCCTTTTTTTTTATTACTTC
TCACTTATTCCCCCCCCTAACACTCCTAACACATTCCTCTGCATTTCTCT
TAACCTCCTCACCCTAAT

Query= MSMg01no199_p22.b1 MSMg01no199_p22.b1 CHROMAT_FILE:
MSMg01no199_p22.b1 PHD_FILE: MSMg01no199_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:45 2005
         (696 letters)



>mm_chrX_5823006_5824101
          Length = 1096

 Score = 1309 bits (677), Expect = 0.0
 Identities = 689/693 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccagaaagtgtaccgggcgttacctcatctattatttagtatctggatatcaaa 63
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagaaagtgtactgggcgttacctcatctattatttagtatctggatatcaaa 263

                                                                       
Query: 64  ctttactctttaacctactggggttctatctaagttcatgcatgtgatccaaaacatcta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttactctttaacctactggggttctatctaagttcatgcatgtgatccaaaacatcta 323

                                                                       
Query: 124 ccaataaatccttattagtacagactacgtagttattcctgaggcccatataaacaaaga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaataaatccttattagtacagactacgtagttattcctgaggcccatataaacaaaga 383

                                                                       
Query: 184 cactattgtcaaacaaaaagttcaagggataaagagactgcttgccaaaagccaaaagcc 243
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 384 cactattgtcaaacaaaaagttcaagggataaagagactgctttccaaaagccaaaagcc 443

                                                                       
Query: 244 aaaaagccaggcctctctttgggtaacattaatccttaaggactttccttggacaatgaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaaagccaggcctctctttgggtaacattaatccttaaggactttccttggacaatgaa 503

                                                                       
Query: 304 gggtccatcaacttagagcccaaataaataccagtgttttccccagatttttactgcagt 363
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 504 gggtccatcaacttagagcccaaataaataccagtgctttccccagatttttactgcagt 563

                                                                       
Query: 364 attcattctttgtgcctcaggaagatgctcagaagatccctagaagaaacatgttgttac 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attcattctttgtgcctcaggaagatgctcagaagatccctagaagaaacatgttgttac 623

                                                                       
Query: 424 tggaaagtcataaagggttacatcaaaaattctatgtagtaatgatatatggatttaaag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tggaaagtcataaagggttacatcaaaaattctatgtagtaatgatatatggatttaaag 683

                                                                       
Query: 484 cagatacaagacagtgatcctatatgttacaaattcttagaggatctttatccttaaagc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagatacaagacagtgatcctatatgttacaaattcttagaggatctttatccttaaagc 743

                                                                       
Query: 544 cagagggataaccatttgggagattattcagcaaggtaataatgctttctgtcattccta 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cagagggataaccatttgggagattattcagcaaggtaataatgctttctgtcattccta 803

                                                                       
Query: 604 tggatgatacagcactcatacttgaagagcatcagagccatggtaacattcaatgctcta 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tggatgatacagcactcatacttgaagagcatcagagccatggtaacattcaatgctcta 863

                                            
Query: 664 gctagtatccatgttccaccaagtgtgagacac 696
           |||||| ||||||||||||||||||||||||||
Sbjct: 864 gctagtgtccatgttccaccaagtgtgagacac 896


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space:   744996
Effective search space used:   744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)