Query= MSMg01no203_n12.b1 MSMg01no203_n12.b1 CHROMAT_FILE:
MSMg01no203_n12.b1 PHD_FILE: MSMg01no203_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:09 2005
(679 letters)
>mm_chrX_84491853_84492931
Length = 1079
Score = 1295 bits (670), Expect = 0.0
Identities = 673/674 (99%)
Strand = Plus / Plus
Query: 6 aattcataaaagtaaccaaatatacttttgaaatagcaatgaaatgattttatggttggg 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattcataaaagtaacaaaatatacttttgaaatagcaatgaaatgattttatggttggg 265
Query: 66 ggtcactagaacatgaggaactacattaaagcatcaaggcatcaggaagttttgagaacc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggtcactagaacatgaggaactacattaaagcatcaaggcatcaggaagttttgagaacc 325
Query: 126 actggcctaagggacagatttctacactctaaattaaatgccaaaatatacttatcaaca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 actggcctaagggacagatttctacactctaaattaaatgccaaaatatacttatcaaca 385
Query: 186 ataaagtataaacaatttccatcaaaatatttattaaagatttaatgaagttatactcac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ataaagtataaacaatttccatcaaaatatttattaaagatttaatgaagttatactcac 445
Query: 246 ccacaattaaataattcatcatttagttatatttaacatgacattcttttgcaatttaat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccacaattaaataattcatcatttagttatatttaacatgacattcttttgcaatttaat 505
Query: 306 atttaagaaaaagtattaaaaactagttggtattatattacacactttagacaattttat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atttaagaaaaagtattaaaaactagttggtattatattacacactttagacaattttat 565
Query: 366 tcttttaactactatctcaatctataaatatactcattaaactggaagttacttaaaatt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tcttttaactactatctcaatctataaatatactcattaaactggaagttacttaaaatt 625
Query: 426 cattttgtctttcaactgaattgttttttagtttactattattattaaaaagaactcaaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cattttgtctttcaactgaattgttttttagtttactattattattaaaaagaactcaaa 685
Query: 486 tgtttttcaaaatgattttgaatgtattaaatgatacctgaaaaacaaaaattcatatga 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgtttttcaaaatgattttgaatgtattaaatgatacctgaaaaacaaaaattcatatga 745
Query: 546 tatttttatcatgataaaggaacacatactatgctattttagattttatcttaaaatata 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tatttttatcatgataaaggaacacatactatgctattttagattttatcttaaaatata 805
Query: 606 tggttatactatttatgttatttaaagtctcctcccccatcttctcgcatgtccccttca 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tggttatactatttatgttatttaaagtctcctcccccatcttctcgcatgtccccttca 865
Query: 666 ctcccagttaagtt 679
||||||||||||||
Sbjct: 866 ctcccagttaagtt 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no203_n12.g1 MSMg01no203_n12.g1 CHROMAT_FILE:
MSMg01no203_n12.g1 PHD_FILE: MSMg01no203_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:09 2005
(194 letters)
>mm_chrX_84549839_84550431
Length = 593
Score = 368 bits (190), Expect = e-106
Identities = 193/194 (99%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 1 ggactttgctacaattccaagatgaagtactttgaaaaagctgaacttagcaaaagcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggactttgctacaattccaagatgaagtactttgaaaaagctgaacttagcaaaagcaag 334
Query: 61 gaaatttcatgccgagacatagaggactttttattaccaaccagggaacctgaaatcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaaatttcatgccgagacatagaggactttttattaccaaccagggaacctgaaatcctt 274
Query: 121 tggtacaaggtatggattctggaagattttattgcccacaaataatttaatgtgcatttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 273 tggtacaaggtatggattctggaagattttattgcccacaaataatttaatgtgca-ttt 215
Query: 181 tttctagagaaatc 194
||||||||||||||
Sbjct: 214 tttctagagaaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 593
Length adjustment: 8
Effective length of query: 186
Effective length of database: 585
Effective search space: 108810
Effective search space used: 108810
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
