Query= MSMg01no205_f21.b1 MSMg01no205_f21.b1 CHROMAT_FILE:
MSMg01no205_f21.b1 PHD_FILE: MSMg01no205_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:14 2005
(703 letters)
>mm_chrX_46679535_46680637
Length = 1103
Score = 1284 bits (664), Expect = 0.0
Identities = 691/700 (98%), Gaps = 1/700 (0%)
Strand = Plus / Plus
Query: 4 ggaattccatgtcatagactacatttactcagaaataaagtacttagaaaacatatagtt 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatgtcatagaatacatttactcagaaataaagtacttagaaaacatatagtt 263
Query: 64 cctgaatgaacagttccccattgacctgtgaaagcagtgtcccagctacacactcattca 123
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 cctgaatgaacagtttcccattgatctgtgaaagcagtgtcccagctacacactcattca 323
Query: 124 aaggtaaggatgaatgctttgaaacatggaatttagaaccagttagtatctaaccatcat 183
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 aaggtaaggatgaatgctttgaaagatggaatttagaaccagttagtatctaaccatcat 383
Query: 184 actattgtgactggtaggcaatcaatctcacaaataaacacaaggtaggagatcttaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actattgtgactggtaggcaatcaatctcacaaataaacacaaggtaggagatcttaagc 443
Query: 244 tgtggactgtagggataacaatttacccaaagtcacataattaattcagcagagtcacta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtggactgtagggataacaatttacccaaagtcacataattaattcagcagagtcacta 503
Query: 304 agtaaatagtgtgaataccaagccccacagaagagatgcatctctgaaattgctatagta 363
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 504 agtaaatagtgtgaataccaagccccagagaagagatgcatctctgaaattgctatagta 563
Query: 364 ttttattcacaatatccaattttcaatgaaaaaaatagaatacacagaaacaagaaagta 423
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttttatttagaatatccaattttcaatgaaaaaaatagaatacacagaaacaagaaagta 623
Query: 424 tgacctgtgtaccaaaaaa-gacactcagtgaaaactctctctacatggcctatgcttat 482
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgacctgtgtaccaaaaaaagacactcagtgaaaactctctctacatggcctatgcttat 683
Query: 483 ggagaccaacttcaaagcaaatattataaatgtgttcaaagaactgaacaaaaccatatt 542
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 684 ggagaccaacttcaaagcaaatattataagtgtgttcaaagaactgaacaaaaccatatt 743
Query: 543 tggaaagttaaagacaagtatcataaggatttctcatcaagtaatgcaggttaatgaaga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tggaaagttaaagacaagtatcataaggatttctcatcaagtaatgcaggttaatgaaga 803
Query: 603 aatattatgaaaaagaacacagtagaaaatttggcagttgaaaagcatcatcactgaaat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aatattatgaaaaagaacacagtagaaaatttggcagttgaaaagcatcatcactgaaat 863
Query: 663 gaagaagtagaatggctcaacaacaagctcaaagatgaaa 702
||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gaagaagtagaatggctcaacaacaagctcaaagatgaaa 903
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space: 757449
Effective search space used: 757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no205_f21.g1 MSMg01no205_f21.g1 CHROMAT_FILE:
MSMg01no205_f21.g1 PHD_FILE: MSMg01no205_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:14 2005
(284 letters)
>mm_chrX_46792987_46793670
Length = 684
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Minus
Query: 1 aagttctaactttattccttgtacaagaatgctttgcattctgacactcagtttccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aagttctaactttattccttgtacaagaatgctttgcattctgacactcagtttccaaaa 425
Query: 61 ctctcctcatggtcctaagagtgaatgattgaagatattggtggatatgacaaaagagga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 424 ctctcctcatggtcctaagagtgaatgattgaagatattggtggatatgacaaaagggga 365
Query: 121 taaggctaaagaaggtcaatatggagatgcatttccggttctagttgatgtggtcttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 taaggctaaagaaggtcaatatggagatgcatttccggttctagttgatgtggtcttgta 305
Query: 181 aagcagagatgctattttctgttcttagagatggcagctatgagcatactttgcaagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aagcagagatgctattttctgttcttagagatggcagctatgagcatactttgcaagttg 245
Query: 241 tcaagagttgttatgggaatgacaagagttataattaaagacct 284
|||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 244 tcaagagttgttatggaaatgacaagagttataattaaagacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
