Query= MSMg01no206_b12.b1 MSMg01no206_b12.b1 CHROMAT_FILE:
MSMg01no206_b12.b1 PHD_FILE: MSMg01no206_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:09 2005
(234 letters)
>mm_chrX_133901909_133902542
Length = 634
Score = 435 bits (225), Expect = e-126
Identities = 231/233 (99%)
Strand = Plus / Plus
Query: 1 gctccatgcttaatacatgatattattattattattattattattattattattattatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctccatgcttaatacatgatattattattattattattattattattattattattatt 260
Query: 61 attatcatcatctgtacatcagaagtcagaagtgttgaaaatggggccagaactttagtc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attattatcatctgtacatcagaagtcagaagtgttgaaaatggggccagaactttagtc 320
Query: 121 aaattctttactaagtgaatgaatttctgtattctcttaggacttactaaatgaatcaat 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 aaattctttactaagtgaatgaatttctgtattctgttaggacttactaaatgaatcaat 380
Query: 181 atatgcatgaatgatgaggttcagcctcacttctgtggccactacagcatcta 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatgcatgaatgatgaggttcagcctcacttctgtggccactacagcatcta 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no206_b12.g1 MSMg01no206_b12.g1 CHROMAT_FILE:
MSMg01no206_b12.g1 PHD_FILE: MSMg01no206_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:09 2005
(289 letters)
>mm_chrX_133994423_133995108
Length = 686
Score = 543 bits (281), Expect = e-159
Identities = 286/289 (98%), Gaps = 3/289 (1%)
Strand = Plus / Minus
Query: 1 tacctttccagcttgtggaactgtaggaggaggaaaacaaaaggagagagaagggaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tacctttccagcttgtggaactgtaggaggaggaaaacaaaaggagagagaagggaaggg 427
Query: 61 agctaagttcacatgaaaaaaaaaaaagaacagaataaaataagtgaaagtaagaccact 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agctaagttcacatg---aaaaaaaaagaacagaataaaataagtgaaagtaagaccact 370
Query: 121 ttccatttgaacacctaaagtgtaaactagacttctctgtgaattcaagttcagggtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttccatttgaacacctaaagtgtaaactagacttctctgtgaattcaagttcagggtcag 310
Query: 181 ctctattgatgactctttagtgagtcagagagacaatgcaagtttgactttctctatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctctattgatgactctttagtgagtcagagagacaatgcaagtttgactttctctatctg 250
Query: 241 cctttactttccaggaggaatgtccattgaagtgaaagccccagtttgt 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cctttactttccaggaggaatgtccattgaagtgaaagccccagtttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 686
Length adjustment: 9
Effective length of query: 280
Effective length of database: 677
Effective search space: 189560
Effective search space used: 189560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
