CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATCACAGTTATCTAATATTTTATTTGTAGATAATCTATTAAAATGT
ATATATTTGATTCCCTAATACAAGTAAAAAAATCAATAACTAAAATACTT
ATTCAAATGCCACCCTTCAGAAATCAACCCCAATTTTGTTTATGAATATC
TTTTACTTCTGGATTTAGAAAGCCATATATAAACTTCTGTGGCATTTTTT
TTAGAGAGGTATCTATACATTTATTTACTGCTACAGTAACAATGACTTTT
TGCTACTATACTCTTCTAATACATTTATAGTTTTTGTTCTTTTGTTTAAG
TCTCTGATGCATTGCAAGTAATTTTTCTTTAGAGATATTTGCCTTTCAAA
TGTTTTCCTCTTTCCTTGTTTCCCCTCCGAAAACCCCCTAACCCATTCCC
CCTCCCCCTGCTCAACAACCCACCCACTCCTGCTTTCTGGCCCTGACATT
CCCCTATACTGGGGCATAGAACCTTCACAGGACCAAGGGCCTCTCCTCAT
CCCTCTCACTGATGTCCCATAAGGCCATCCTCTGCTATATATGTGGCTGG
AGCCATGGGTCATCACTTCCTTTGTTTGGTGGTTTAGTCCCAAGGAGCTC
TGGGGGTACTGGTTAGTTCATATTGTCGCTCCACCTATGGGGCTGCAAAC
CCCTTCAGTTCCTTGTTTCC

TCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAACAGGTAAGGAAACAGGAGCTG
GTGCAGAGGCAATGGAGGGATGTTGCTTACTGACTTGCTTCCCTTGTCTT
TCTCAACCTGCTCTCTTATAGAACCCAGGGAACTTATGGGCTCTCTTATG
CCATCCCAGGGATGGTCCCACCCACAAGGGGCCCTCCCCACTTGATCACT
AATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGACATTTCCTCAACT
GAAGCTCCTTTCTCTGATAACTCCAGCTGTGTCAAGTTGACACAAAACCA
GCCAGTACACAGTTAAGCCAATGCTTTTTATATTACTTATGACTATTGTG
AGGGGTGTTATTTCCCTAACTTCTTTCTCAGCCTGTTTATCTTTTAGTAG
AGGAAGGCTAATGATATGCTTGAGATAATTTTATATCCAACCACTTTGCT
GAAGTTGTTTGCGTAGTATAGGATTTCAAGTGGAATTTTTGGAGTCACGT
GNGCCGACTATCCTATCATCTGCAAATAGTGATATGTTGACGTTTCGACG
TTGTATCCTTTGACTTCCTTTGTCTGTGTCGTTGGTCCGCCCACAATTTT
CATTTATATATTTTCATATTAATGTCACTATGTATGCTAATCTTGATGAA
TTCGCTTTTTTTCCCTGTTCTN

Query= MSMg01no210_a02.b1 MSMg01no210_a02.b1 CHROMAT_FILE:
MSMg01no210_a02.b1 PHD_FILE: MSMg01no210_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:21 2005
         (593 letters)



>mm_chrX_115133887_115134879
          Length = 993

 Score = 1123 bits (581), Expect = 0.0
 Identities = 587/589 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatcacagttatctaatattttatttgtagataatctattaaaatgtatatattt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcacagttatctaatattttatttgtagataatctattaaaatgtatatattt 264

                                                                       
Query: 65  gattccctaatacaagtaaaaaaatcaataactaaaatacttattcaaatgccacccttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gattccctaatacaagtaaaaaaatcaataactaaaatacttattcaaatgccacccttc 324

                                                                       
Query: 125 agaaatcaaccccaattttgtttatgaatatcttttacttctggatttagaaagccatat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agaaatcaaccccaattttgtttatgaatatcttttacttctggatttagaaagccatat 384

                                                                       
Query: 185 ataaacttctgtggcattttttttagagaggtatctatacatttatttactgctacagta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ataaacttctgtggcattttttttagagaggtatctatacatttatttactgctacagta 444

                                                                       
Query: 245 acaatgactttttgctactatactcttctaatacatttatagtttttgttcttttgttta 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 acaatgactttttgctactatactcttctaatacatttatagtttttgttctttagttta 504

                                                                       
Query: 305 agtctctgatgcattgcaagtaatttttctttagagatatttgcctttcaaatgttttcc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtctctgatgcattgcaagtaatttttctttagagatatttgcctttcaaatgttttcc 564

                                                                       
Query: 365 tctttccttgtttcccctccgaaaaccccctaacccattccccctccccctgctcaacaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctttccttgtttcccctccgaaaaccccctaacccattccccctccccctgctcaacaa 624

                                                                       
Query: 425 cccacccactcctgctttctggccctgacattcccctatactggggcatagaaccttcac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cccacccactcctgctttctggccctgacattcccctatactggggcatagaaccttcac 684

                                                                       
Query: 485 aggaccaagggcctctcctcatccctctcactgatgtcccataaggccatcctctgctat 544
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggaccaagagcctctcctcatccctctcactgatgtcccataaggccatcctctgctat 744

                                                            
Query: 545 atatgtggctggagccatgggtcatcacttcctttgtttggtggtttag 593
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atatgtggctggagccatgggtcatcacttcctttgtttggtggtttag 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)