Query= MSMg01no210_n11.b1 MSMg01no210_n11.b1 CHROMAT_FILE:
MSMg01no210_n11.b1 PHD_FILE: MSMg01no210_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:32 2005
(315 letters)
>mm_chrX_166368831_166369544
Length = 714
Score = 565 bits (292), Expect = e-165
Identities = 304/308 (98%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 5 gaattcacggccagcctaggctatataaccagtatcaggcaagtcaaggcctcatagtgc 64
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaattcagggccagcctaggctatataaccagtatcaggcaagtcaaggcctcatagtgc 536
Query: 65 gaccctatctcataaacaaacaaataaacaaacctaagagtgaaattcccaatctacacc 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 535 gaccctatctcataaacaaacaaataaacaaacctaagagtgaaattcccgatctacacc 476
Query: 125 tccatatataaagtgccacataaaaatgagcttttactggaactttcagaaaaaataatt 184
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 475 tccatatataaagtgccacataaaattgagcttttactggaactttcag-aaaaataatt 417
Query: 185 agaaattctcagtggtttgatccactgaaagctgcattgcatgaagaaattcctacccca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agaaattctcagtggtttgatccactgaaagctgcattgcatgaagaaattcctacccca 357
Query: 245 acctttaaagtgagcatagcaaaacagtttcaagcttcagatttagcttgactgaagggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acctttaaagtgagcatagcaaaacagtttcaagcttcagatttagcttgactgaagggg 297
Query: 305 cacatgaa 312
||||||||
Sbjct: 296 cacatgaa 289
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no210_n11.g1 MSMg01no210_n11.g1 CHROMAT_FILE:
MSMg01no210_n11.g1 PHD_FILE: MSMg01no210_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:32 2005
(282 letters)
>mm_chrX_166243988_166244669
Length = 682
Score = 538 bits (278), Expect = e-157
Identities = 281/282 (99%)
Strand = Plus / Plus
Query: 1 catttatttttatgatttgaataaatattggaaaagcataacctaacttattcttttata 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 catttatttttatgatttgaataaatattggaaaagcataacctaatttattcttttata 260
Query: 61 tcagaaaaaatgatgagataatttctactaaccattttcctattagctgatttatgaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagaaaaaatgatgagataatttctactaaccattttcctattagctgatttatgaatc 320
Query: 121 tatctttttattcaatagtaaggtcttgacattgaaagactattcacatggctctagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatctttttattcaatagtaaggtcttgacattgaaagactattcacatggctctagcaa 380
Query: 181 catcatgcatttatttaaaccaaatttgactagtggtatataaataatctcttctaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcatgcatttatttaaaccaaatttgactagtggtatataaataatctcttctaaacc 440
Query: 241 atattgatttcccaaagggaatattaaatgctaaataacttc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattgatttcccaaagggaatattaaatgctaaataacttc 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
