Query= MSMg01no213_c24.b1 MSMg01no213_c24.b1 CHROMAT_FILE:
MSMg01no213_c24.b1 PHD_FILE: MSMg01no213_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:09 2005
(675 letters)
>mm_chrX_112038995_112040069
Length = 1075
Score = 1118 bits (578), Expect = 0.0
Identities = 614/644 (95%), Gaps = 28/644 (4%)
Strand = Plus / Minus
Query: 32 gaaatttggaaaatctaattaaggatttaacagatcctaactagtcatccccaccacccc 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 gaaatttggaaaatctaattaaggatttaacagatcctaactagtcatccccaccacccc 1016
Query: 92 accccaactgctgaggtttggaaactctatctttctgttggacctttgttctcttatgct 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 accccaactgctgaggtttggaaactctatctttctgttggacctttgttctcttatgct 956
Query: 152 ttttccagaggtctctatctctatctatctatctatctatctatctatctatctatctat 211
||||||||||||||||||| |||||||||||||
Sbjct: 955 ttttccagaggtctctatc----------------------------tctatctatctat 924
Query: 212 ctatctatctatctatctatctatctatctatctatctatctatctatacctatatctaa 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 ctatctatctatctatctatctatctatctatctatctatctatctatacctatatctaa 864
Query: 272 tcagtctaggggagagttagaggtcagtaaatcaggttatatactgtatagaaaaaggac 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 tcagtctaggggagagttagaggtcagtaaatcaggttatatactgtatagaaaaaggac 804
Query: 332 ttcagggattacaatgttattcatgttctgccaaggacaatatgtacctgcatcatgttc 391
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 803 ttcagggattacaatgttattcatgttctgccaaggacaatatgtatctgcatcatgttc 744
Query: 392 taaaattacctgacttacttgtgctgttatactacatgtgtctcctttaactcactagta 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 taaaattacctgacttacttgtgctgttatactacatgtgtctcctttaactcactagta 684
Query: 452 attcactcctccaactctatgtattctggtctgtggtatgctctgggtattttcctataa 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 attcactcctccaactctatgtattctggtctgtggtatgctctgggtattttcctataa 624
Query: 512 tatagaagggagagtaaatattgggtttgatccattattaatgaaggttaaacagattca 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tatagaagggagagtaaatattgggtttgatccattattaatgaaggttaaacagattca 564
Query: 572 aagtaaggacaggaataaccactgcaatcaccataggtacctcagccctgcttattaaga 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aagtaaggacaggaataaccactgcaatcaccataggtacctcagccctgcttattaaga 504
Query: 632 gtgatcagactttatgacctgagttaaaggagtagaaaactgaa 675
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 503 gtgatcagactttaagacctgagttaaaggagtagaaaactgaa 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_c24.g1 MSMg01no213_c24.g1 CHROMAT_FILE:
MSMg01no213_c24.g1 PHD_FILE: MSMg01no213_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:09 2005
(631 letters)
>mm_chrX_111977787_111978817
Length = 1031
Score = 1166 bits (603), Expect = 0.0
Identities = 624/631 (98%)
Strand = Plus / Plus
Query: 1 ccctcttattgagtgatataatattggtctcctgaaaacagaactgctggaaagtaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctcttattgagtgatataatattggtctcctgaaaacagaactgctggaaagtaattt 260
Query: 61 gcaaaattcattccatgtcttttaaatgtctaattccctcttacaatattttaatgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaaattcattccatgtcttttaaatgtctaattccctcttacaatattttaatgaaaa 320
Query: 121 aattaatactaaatatagaaatttctatgagtcagtttattacaggccagtagtagtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaatactaaatatagaaatttctatgagtcagtttattacaggccagtagtagtata 380
Query: 181 tttatttcactttgctctgactctggcactttaagctaatatttcagtttttcaaaatat 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatttcactttgctctgactctggcactttaagctaatatttcagtttttcaaaatat 440
Query: 241 ggttagttcttaaacgtattctccagatatgtaacaaaatttaccgttcgatcatcctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 441 ggttagttcttaaacgtattctccagatatgtaacaaaatttaccgttcgagcagcctga 500
Query: 301 tctgattacaaagaacaattttagttagaaggccttgctgccgggcagcgaatatctaca 360
|||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 501 tctgattagaaagaacaattttagttagaaggccttgctgccaggcagtgaatatctaca 560
Query: 361 cattactggagaggaaggacaaggaaggattaggaggtaactgctctgaactgtacagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattactggagaggaaggacaaggaaggattaggaggtaactgctctgaactgtacagag 620
Query: 421 atcaaggtcaggagcatcccctggatttcatccaggagattagaacgtgggattcgaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcaaggtcaggagcatcccctggatttcatccaggagattagaacgtgggattcgaaga 680
Query: 481 atctaatgcttaccctacctcaccagatcctgctccttgttagtcttctttaactcttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atctaatgcttaccctacctcaccagatcctgctccttgttagtcttctttaactcttag 740
Query: 541 ttgacttctatcttttctctccagaggctctccatcaaaatgattccctctgccagctca 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttacttctatcttttctctccagaggctctccatcaaaatgattccctctgccagctca 800
Query: 601 gccctatgagataattagggactaactgaac 631
|||||||||||||||||||||||||||||||
Sbjct: 801 gccctatgagataattagggactaactgaac 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
