Query= MSMg01no217_o01.b1 MSMg01no217_o01.b1 CHROMAT_FILE:
MSMg01no217_o01.b1 PHD_FILE: MSMg01no217_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:41 2005
(424 letters)
>mm_chrX_149828725_149829548
Length = 824
Score = 752 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Plus
Query: 16 gaattctaccatccagaaggggtcctgtctacttctacccatccctcacgttttacagat 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattctaccatccagaaggggtcctgtctacttctacccatccctcacgttttacagat 275
Query: 76 gaggcaaatacgggtcagattctttctccagataattccttgaggccttacagacctgta 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gaggcaaatacgggtcagattctttctccagataattccttgaggccttacagacctgta 335
Query: 136 tacaccgtctcccagggatcacactagtaaaccaaattaaagaaaaagaagttatgtgat 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tacaccgtctcccagggatcacactagtaaaccaaattaaagaaaaagaagttatgtgat 395
Query: 196 tggttgcaatatttgtccaattttatgttacacttcagaaaactttaaattcatgtatat 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tggttgcaatatttgtccaattttatgttacacttcagaaaactttaaattcatgtatat 455
Query: 256 ttggtgacaaagtaagtagggtgtgcttatggtcatgaccacttaacaccgggcacacag 315
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 456 ttggtgacaaagtaagtagggtgtgcttatggtcatgaccacttaacaccaggcacacag 515
Query: 316 tgtttcaagtcacattttttgataattctagatttgttttaatttaccttgtttcaagtt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgtttcaagtcacattttttgataattctagatttgttttaatttaccttgtttcaagtt 575
Query: 376 tcaatgtctttgcagagcataaattctccataa 408
|||||||||||||||||||||||||||||||||
Sbjct: 576 tcaatgtctttgcagagcataaattctccataa 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_o01.g1 MSMg01no217_o01.g1 CHROMAT_FILE:
MSMg01no217_o01.g1 PHD_FILE: MSMg01no217_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:41 2005
(376 letters)
>mm_chrX_149911164_149911939
Length = 776
Score = 563 bits (291), Expect = e-165
Identities = 336/373 (90%), Gaps = 35/373 (9%)
Strand = Plus / Minus
Query: 1 tagagcaatgtatatgtatatttataatttataatcttaaaattatgcttactttatttt 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 762 tagagcaatgtatatgtat-------atttataatcttaaaattatgcttactttatttt 710
Query: 61 ctcctagaatgaataaatatatatttagagagagagagagacagagagagagagagagag 120
||||||||||||||| ||||||||| |||||||
Sbjct: 709 ctcctagaatgaatatatatatatt----------------------------gagagag 678
Query: 121 agagagagagagagagagagagagagagagagagagagaatgagaatcagtcagcttcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agagagagagagagagagagagagagagagagagagagaatgagaatcagtcagcttcga 618
Query: 181 gctcacaattctcttgcctcagcctcctgaatgctggggttacattgtgcatggctttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gctcacaattctcttgcctcagcctcctgaatgctggggttacattgtgcatggctttga 558
Query: 241 atcttgaagaaaaatgcagcactcttttcttaggtccatttggatttctgatccttgcag 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 557 atcttgaagaaaaatgcagcactcttttctgaggtccatttggatttctgatccttgcag 498
Query: 301 tgggtaaagtaaaacctgtgtcccagcctctgtctccagacatattcacattttttcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgggtaaagtaaaacctgtgtcccagcctctgtctccagacatattcacattttttcctt 438
Query: 361 tgcctaattccta 373
|||||||||||||
Sbjct: 437 tgcctaattccta 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
