CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCAGTTCTCGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGAAGTCCACCTTCTTGAGTTCTTCATATATGTTGGATATTAGTCCC
CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT
TTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA
TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT
CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCAAC
TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGATCCTTGA
TCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGC
ATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAAT
GCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGT
GACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGG
TCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGC
TCTGTAGTANAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTCTTT
TATCCTTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGGCCAGCTGAGAAATGTCAGAGAAG
TCTGAAGTCTAGGAGGCTGTCTTACTTTGGGGTACTATAAGGGATGTTCC
ATCTTCTGCTATTAAGGCAATTTCTCTTCTAAGTCCCACAGGATGAAAGA
TAAAAATAAACCCCTCTCATTAGCACAGAAGACAAAAGATACTGGCTGAA
GTATGTTGTGAGATAAATTAATTATGCATAAATATGAAATTGATAAGCCA
ACATAATCTGGGGAAAGAAATGCTATCAGGTGATCTTCTGGTGTTGAGAA
ATTTAAATTAGGCAACTTTTCTTAAAGAACTTCAGGTGAATAAAAAAGGT
AAAAATCAACTCTTTAGGAAGATTAATAGCATTAAAACTTAAATAGAAAG
ACTCTAAGACATAGGTGAGAGGAATATTATAGGAAAAATACCAAATGGAA
GAAAGGAATTAATGAGAAGTAAAAAAAGGAAAACCCAGGCAGAAGAAAAA
TGGTTTTATCACAAATAGAAAGATATGCTTAAGCTCCATACTGGGTCCAA
TGCCCCATAGCAGGACGGTCTGAGCGGAGATCTTGTTTTCCTATTCAGGC
AAACAAAGGCTCTTCTTTATGAGCATCATCTGTGGCGAATAGGTCTGACC
ATCGCATAGCTTATCCCCCCTCCCTGTCTTCTGGTTATCCAAAA

Query= MSMg01no231_a04.g1 MSMg01no231_a04.g1 CHROMAT_FILE:
MSMg01no231_a04.g1 PHD_FILE: MSMg01no231_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:11 2005
         (666 letters)



>mm_chrX_155730205_155731270
          Length = 1066

 Score = 1272 bits (658), Expect = 0.0
 Identities = 664/666 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctggccagctgagaaatgtcagagaagtctgaagtctaggaggctgtcttactttgggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tctggccagctgagaaatgtcagagaagtctgaagtctaggaggctgtcttactttgggg 807

                                                                       
Query: 61  tactataagggatgttccatcttctgctattaaggcaatttctcttctaagtcccacagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tactataagggatgttccatcttctgctattaaggcaatttctcttctaagtcccacagg 747

                                                                       
Query: 121 atgaaagataaaaataaacccctctcattagcacagaagacaaaagatactggctgaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 atgaaagataaaaataaacccctctcattagcacagaagacaaaagatactggctgaagt 687

                                                                       
Query: 181 atgttgtgagataaattaattatgcataaatatgaaattgataagccaacataatctggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 atgttgtgagataaattaattatgcataaatatgaaattgataagccaacataatctggg 627

                                                                       
Query: 241 gaaagaaatgctatcaggtgatcttctggtgttgagaaatttaaattaggcaacttttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaaagaaatgctatcaggtgatcttctggtgttgagaaatttaaattaggcaacttttct 567

                                                                       
Query: 301 taaagaacttcaggtgaataaaaaaggtaaaaatcaactctttaggaagattaatagcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 taaagaacttcaggtgaataaaaaaggtaaaaatcaactctttaggaagattaatagcat 507

                                                                       
Query: 361 taaaacttaaatagaaagactctaagacataggtgagaggaatattataggaaaaatacc 420
           | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 506 tgaaacttaaatagaaagactctaagatataggtgagaggaatattataggaaaaatacc 447

                                                                       
Query: 421 aaatggaagaaaggaattaatgagaagtaaaaaaaggaaaacccaggcagaagaaaaatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aaatggaagaaaggaattaatgagaagtaaaaaaaggaaaacccaggcagaagaaaaatg 387

                                                                       
Query: 481 gttttatcacaaatagaaagatatgcttaagctccatactgggtccaatgccccatagca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gttttatcacaaatagaaagatatgcttaagctccatactgggtccaatgccccatagca 327

                                                                       
Query: 541 ggacggtctgagcggagatcttgttttcctattcaggcaaacaaaggctcttctttatga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggacggtctgagcggagatcttgttttcctattcaggcaaacaaaggctcttctttatga 267

                                                                       
Query: 601 gcatcatctgtggcgaataggtctgaccatcgcatagcttatcccccctccctgtcttct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcatcatctgtggcgaataggtctgaccatcgcatagcttatcccccctccctgtcttct 207

                 
Query: 661 ggttat 666
           ||||||
Sbjct: 206 ggttat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)