Query= MSMg01no232_b07.b1 MSMg01no232_b07.b1 CHROMAT_FILE:
MSMg01no232_b07.b1 PHD_FILE: MSMg01no232_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:29 2005
(314 letters)
>mm_chrX_48879787_48880501
Length = 715
Score = 536 bits (277), Expect = e-157
Identities = 301/309 (97%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 5 gaattcaccccagtctccatttttagtctattagaatatctagatggcacattctaaaag 64
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaattcactccagtctttatttttagtctattagaatatctagatggcacattctaaaag 454
Query: 65 ctacttcaaatatgatcctccatgacagcattttcccccagggctttgccttttttacac 124
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctacttcaaagatgatgttccatgacagcattttcccccagggctttgccttttttacac 394
Query: 125 gccaagggtatgtgtgagtacagttccccagagcccacgccaagtgaccaacttacactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gccaagggtatgtgtgagtacagttccccagagcccacgccaagtgaccaacttacactt 334
Query: 185 tgagattattctctcaaaggacaaggagctca-tttttgtggtctgctttcccatttttt 243
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 333 tgagattattctctcaaaggacaaggagctcattttttgtggtctgctttcccatttttt 274
Query: 244 ctttgtttttaaggttgcattcagaacacatagaagggtcttcgacagctctttcatcat 303
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 273 ctttgtttttaaggttgcattcagaacacatagaaggggcttcgacagctctttcatcat 214
Query: 304 gttctatga 312
|||||||||
Sbjct: 213 gttctatga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_b07.g1 MSMg01no232_b07.g1 CHROMAT_FILE:
MSMg01no232_b07.g1 PHD_FILE: MSMg01no232_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:29 2005
(223 letters)
>mm_chrX_48719200_48719823
Length = 624
Score = 371 bits (192), Expect = e-107
Identities = 217/226 (96%), Gaps = 3/226 (1%)
Strand = Plus / Plus
Query: 1 tttgtcttctcaaa-tcacagaaatgaaacaagtcatgagaaaaacatgcaccggagatt 59
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tttgtcttctcaaaatcacagaaatgaaacaagtcatgagaaaaacatgcaagggagatt 260
Query: 60 aacaggacggataaaaagtaatggcattgaatgtttcttcaatattttaaaatatggcag 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaggacggataaaaagtaatggcattgaatgtttcttcaatattttaaaatatggcaa 320
Query: 120 atatgcctcatagtataaacaatgaaaaacagaatatcacagtttctctctgtgatatca 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgcctcatagtagaaacaatgaaaaacagaatatcacagtttctctctgtgatatca 380
Query: 180 tgtgtgtgtgt--ttgtgtgtttgtgtgtgtgtgtgtgtgagagag 223
||||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 381 tgtgtgtgtgtgtttgtgtgtttgtgtgtgtgtgtgagagagagag 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 624
Length adjustment: 9
Effective length of query: 214
Effective length of database: 615
Effective search space: 131610
Effective search space used: 131610
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
