CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTGAGCACACAACTATGTCACATCTGGAAGACACCATTTCACAGCG
CTCCTTTCCATTCTGCCGTTCTTCCATTCTTTCTGCCCCTCCCTCCCAGA
TGTTCTCTGAGCTGTGTGTGTGAGATGATATTGATAATAGGTGTCTCATT
TTGAGTTGAGCACTCAGGGTCACTTATTCTCATTAATTTTGAGCAGTTAT
GATCCATTACTCACTGCAAAAAGAAGCCTCTGACTAAAATTAAAATTCCA
CATCTCTGGGTATAATCATAAATATTTAGAAGGCTTTTTGACAACTTGAC
TATTTAACTATTCAATAATAGACATCCCATTAGGGCCTAAGTTATTGCTG
ATATTATAATAACTGTTGATGTCAAAAACTGTCACATAGAAAGGACACAA
TTAGTTTCTGAGAATGTAAACTTAATGAAGACAAAATCATGGCAAGAGGA
AGCAATTAGTCCTAATAATTTGGGTACCTTTGTTTTTCCTTTCCCTGACT
GTGGAGCTTGAATTAAGATGAAGTGTTCTAGACTGGCTGTCAATAGTATT
GATTGGTCTCACAAGATAATTACTCCCTTCTTGCCTCACGGNTCTTGAGT
GAGCTAACTGGAGTTGCTATTTTCATAGAAGGGCCAGGTACTCAAGACTT
TCCTTCCTGATTTANAAAGTATTTAAAAGGAACGAGGAAAAGN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAAGGCTGCCTCAGTGTCCTGGC
TCACGGCCCTGTGAGGATTACAGGCCTGTCCCATCCCCACATTTGATAGG
TGGGGAGACCGAGGCGAGAAGAGGAACAGAGACTTTTCCACTCACCAGGT
AAGGAGGAAGGGATAATTGGATGTAGACGGAGGCTGGAGCCCAAGGGCCT
GGAATCTGACCGGCAGCTTTGCCGCTACCTAGTTTTATTTCACCCTCTCT
AACATCTACTTTGCTTCTTTTAAAATGGGGGTGTAATGCCTACTTTGAGG
GTCAGAGAACTGGAGAGGATATATGGGCAGCTTCTGGCATAACTAGGTGT
TCTATAGACTGTAGCTTTAAAACGCTACTGTCTCCACATACTCATTCCTT
TATCCTTCCCAACACATTTTTTTTTGTATTGTCATCTCCACAAATCTGAA
CATACGTCATACTTTTATCGAGGAATAATTCAGCTACTGTGAAATAGATC
TTGAGTGTAGAACTTGATGAGTTTTGACTAGTGTAACCACCACCCTGATC
AAGACAAAAGAAAGACGCGGCCACCACGTGGTCCCTGTAATCCTAGCTCT
CAGGAGTCTGAGGCAAGAAAAATATGCATTTGAGACAAACCTGGGCTACA
CAGAGAGACCTTCATGCACTGANGAGGGTGATTTGGNTGG

Query= MSMg01no233_k13.g1 MSMg01no233_k13.g1 CHROMAT_FILE:
MSMg01no233_k13.g1 PHD_FILE: MSMg01no233_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:24 2005
         (637 letters)



>mm_chrX_54342337_54343373
          Length = 1037

 Score = 1201 bits (621), Expect = 0.0
 Identities = 633/637 (99%), Gaps = 1/637 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataaggctgcctcagtgtcctggctcacggccctgtgaggattacaggcctgtcccatcc 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ataaggctgcctcagtgtcctggctcacggccctgtgaggattacaggtctgtcccatcc 260

                                                                       
Query: 61  ccacatttgataggtggggagaccgaggcgagaagaggaacagagacttttccactcacc 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ccacatttgataggtggggagaccgaggcgagaagaggaacagagatttttccactcacc 320

                                                                       
Query: 121 aggtaaggaggaagggataattggatgtagacggaggctggagcccaagggcctggaatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtaaggaggaagggataattggatgtagacggaggctggagcccaagggcctggaatc 380

                                                                       
Query: 181 tgaccggcagctttgccgctacctagttttatttcaccctctctaacatctactttgctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaccggcagctttgccgctacctagttttatttcaccctctctaacatctactttgctt 440

                                                                       
Query: 241 cttttaaaatgggggtgtaatgcctactttgagggtcagagaactggagaggatatatgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 441 cttttaaaatgggggtgtaatgcctactttgagggtcagagaactggagaggatatatgt 500

                                                                       
Query: 301 gcagcttctggcataactaggtgttctatagactgtagctttaaaacgctactgtctcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagcttctggcataactaggtgttctatagactgtagctttaaaacgctactgtctcca 560

                                                                       
Query: 361 catactcattcctttatccttcccaacacatttttttttgtattgtcatctccacaaatc 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 catactcattcctttatccttcccaacacatttttttt-gtattgtcatctccacaaatc 619

                                                                       
Query: 421 tgaacatacgtcatacttttatcgaggaataattcagctactgtgaaatagatcttgagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgaacatacgtcatacttttatcgaggaataattcagctactgtgaaatagatcttgagt 679

                                                                       
Query: 481 gtagaacttgatgagttttgactagtgtaaccaccaccctgatcaagacaaaagaaagac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtagaacttgatgagttttgactagtgtaaccaccaccctgatcaagacaaaagaaagac 739

                                                                       
Query: 541 gcggccaccacgtggtccctgtaatcctagctctcaggagtctgaggcaagaaaaatatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcggccaccacgtggtccctgtaatcctagctctcaggagtctgaggcaagaaaaatatg 799

                                                
Query: 601 catttgagacaaacctgggctacacagagagaccttc 637
           |||||||||||||||||||||||||||||||||||||
Sbjct: 800 catttgagacaaacctgggctacacagagagaccttc 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)