MoG+ -Mouse Genome database with high added value-

BAC clone ordering.

BAC Information

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BAC

Clone Name	MSMg01-235A10
Chromosome	X (Build37)
Map Location	155,472,357 - 155,610,762
singlet/doublet	doublet
Overlap gene	LOC100040371
Upstream gene	Cnksr2, EG667483, LOC671033, LOC667487, LOC436243
Downstream gene	Rps6ka3, Eif1ay, Mtap7d2, A830080D01Rik, LOC100041359, Sh3kbp1, LOC667524, Pdha1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cnksr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245684 MGI:2661175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667483 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667483 MGI:3645697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 24 Proteins pseudo : _no_value

name	LOC671033 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671033
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667487 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 359 ESTs, 9 Proteins pseudo : _no_value

name	LOC436243 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	LOC100040371 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040371
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Rps6ka3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110651 MGI:104557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif1ay (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66235 MGI:1913485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtap7d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78283 MGI:1917474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A830080D01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382252 MGI:2685992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041359 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041359
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 137 ESTs, 1 Protein

name	Sh3kbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58194 MGI:1889583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Pdha1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18597 MGI:97532
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnksr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343125 GeneID:245684 MGI:2661175
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : connector enhancer of kinase suppressor of Ras 2 transcript_id : NM_177751.2

name	Rps6ka3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22507356 GeneID:110651 MGI:104557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S6 kinase polypeptide 3 transcript_id : NM_148945.1

name	Eif1ay (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370237 GeneID:66235 MGI:1913485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 1A, Y-linked transcript_id : NM_025437.3

name	Mtap7d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487456 GeneID:78283 MGI:1917474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAP7 domain containing 2 transcript_id : NM_001081124.1

name	A830080D01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115511061 GeneID:382252 MGI:2685992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A830080D01 gene transcript_id : NM_001033472.2

name	LOC100041359 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272528 GeneID:100041359
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 137 ESTs, 1 Protein product : similar to hepatitis B virus X interacting protein transcript_id : XM_001476187.1

name	Sh3kbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892923 GeneID:58194 MGI:1889583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-domain kinase binding protein 1 transcript_id : NM_021389.4

name	Pdha1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543467 GeneID:18597 MGI:97532
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyruvate dehydrogenase E1 alpha 1 transcript_id : NM_008810.2

name	Cnksr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244248 CCDS:CCDS30501.1 GeneID:245684 MGI:2661175
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] [Evidence IEA]; GO:0019901 - protein kinase binding [Evidence ISS] GO_process : GO:0007243 - protein kinase cascade [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : connector enhancer of KSR2 product : connector enhancer of kinase suppressor of Ras 2 protein_id : NP_808419.1

name	Rps6ka3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507357 CCDS:CCDS30502.1 GeneID:110651 MGI:104557
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 note : ribosomal protein S6 kinase 2 product : ribosomal protein S6 kinase polypeptide 3 protein_id : NP_683747.1

name	Eif1ay (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541824 GeneID:66235 MGI:1913485
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : eukaryotic translation initiation factor 1A, Y-linked protein_id : NP_079713.2

name	Mtap7d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487457 GeneID:78283 MGI:1917474
definition	codon_start : 1 note : novel E-MAP-115 family protein product : MAP7 domain containing 2 protein_id : NP_001074593.1

name	A830080D01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115511062 CCDS:CCDS30503.1 GeneID:382252 MGI:2685992
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC382252 protein_id : NP_001028644.2

name	LOC100041359 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272529 GeneID:100041359
definition	codon_start : 1 product : similar to hepatitis B virus X interacting protein protein_id : XP_001476237.1

name	Sh3kbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27151744 GeneID:58194 MGI:1889583
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : Sh3 containing, expressed in astrocytes product : SH3-domain kinase binding protein 1 protein_id : NP_067364.2

name	Pdha1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679261 GeneID:18597 MGI:97532
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]; GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]; GO:0004738 - pyruvate dehydrogenase activity [Evidence IMP] GO_process : GO:0006096 - glycolysis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : pyruvate dehydrogenase E1alpha subunit product : pyruvate dehydrogenase E1 alpha 1 protein_id : NP_032836.1

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 1 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 2 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 3 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 4 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 5 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 6 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 7 pseudo : _no_value

name	LOC100040371 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040371
definition	number : 1 pseudo : _no_value

name	LOC667524 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667524
definition	number : 1 pseudo : _no_value

name	EG667483 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272498 GeneID:667483 MGI:3645697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 24 Proteins product : predicted gene, EG667483 pseudo : _no_value transcript_id : XR_002032.2

name	LOC667487 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272499 GeneID:667487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 359 ESTs, 9 Proteins product : similar to 60S ribosomal protein L9 pseudo : _no_value transcript_id : XR_031772.1

name	LOC436243 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272500 GeneID:436243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to protein 40kD pseudo : _no_value transcript_id : XR_031791.1

clone name	MSMg01-449I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115M20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-170J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171N08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-116B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252G15
singlet/doublet	singlet
plural/unique	unique