Query= MSMg01no261_i14.b1 MSMg01no261_i14.b1 CHROMAT_FILE:
MSMg01no261_i14.b1 PHD_FILE: MSMg01no261_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:57 2005
(648 letters)
>mm_chrX_104076456_104077503
Length = 1048
Score = 1191 bits (616), Expect = 0.0
Identities = 637/644 (98%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 5 gaattcactggatatgctcatgttctccaaaaatatcaaactccatctaactgcaaagta 64
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactggaaatgttcatgttctccaaaaatatcaaactccatctaactgcaaagta 264
Query: 65 ggtttgtgtgtggctcccaggaacacagctgggagtgcaccaggacagtgggcaggctac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtttgtgtgtggctcccaggaacacagctgggagtgcaccaggacagtgggcaggctac 324
Query: 125 aggctgtggcccaaaagccacacctaatatcacgatccaggagtcccaaggtcccaaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggctgtggcccaaaagccacacctaatatcacgatccaggagtcccaaggtcccaaatt 384
Query: 185 ctctaaagatattaaaaatagagggaattcttacacctgtatctacaaggccaacataac 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 ctctaaagatattaaaaatagagggaattcttacacctgtatctacaaagccaacataac 444
Query: 245 taataacagggaaagataaggccagaacaacataaaacaaatatacgccaatatctttta 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 taataacagggaaagataaggccagaacaaca-aaaacaaatatacgccaatatctttta 503
Query: 305 tgaacagacacaaaattcttgaacaagatactagtgactaaacactagtaattaaaaata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaacagacacaaaattcttgaacaagatactagtgactaaacactagtaattaaaaata 563
Query: 365 ttattcacagtgtttcaggacttcatcccaaggatataagattggtcaaagacatacaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttattcacagtgtttcaggacttcatcccaaggatataagattggtcaaagacatacaaa 623
Query: 425 taatttaataatgaaataccatatcaacaaaaaaacctaatgtcctctcaactgaaacag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taatttaataatgaaataccatatcaacaaaaaaacctaatgtcctctcaactgaaacag 683
Query: 485 aaaaagagttcaactgcattcaacatccttttgtgatagcaatgctaaaagccaggctga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaaaagagttcaactgcattcaacatccttttgtgatagcaatgctaaaagccaggctga 743
Query: 545 caaagtccatacctcaacataataaagaccatctatattaagccaatgactaacattata 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 744 caaagtccatacctcaacataataaagaccatctatattaagccaatgactaacattaca 803
Query: 605 tcgaatgggataatgttgaaaattgtttctctttaaaatctgga 648
|| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 804 tcaaatgggaaaatgttgaaaattgtttctctttaaaatctgga 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_i14.g1 MSMg01no261_i14.g1 CHROMAT_FILE:
MSMg01no261_i14.g1 PHD_FILE: MSMg01no261_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:57 2005
(572 letters)
>mm_chrX_104144365_104145336
Length = 972
Score = 1096 bits (567), Expect = 0.0
Identities = 570/571 (99%)
Strand = Plus / Minus
Query: 2 ttgcaaggagtcttaacactgtgatgactagttttctaggaaatcatgtgatcaatctca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttgcaaggagtcttaacactgtgatgactagttttctaggaaatcatgtgatcaatctca 576
Query: 62 tcattcctggatcacaaagtcatctgaatttttagcaactgaatgaatacaaccaagaag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tcattcctggatcacaaagtcatctgaatttttagcaactgaatgaatacaaccaagaag 516
Query: 122 caaaggtctggagttttaaagctgtggtggaagttagatatatttcatgcttctttcttt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 caaaggtctggagttttaaagctgtggtggaagttagatatatttcatgcttctttcttt 456
Query: 182 aactatccttagagatacttgtgtatcatagtgaaatgactgacatttttcctttctggg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aactatccttagagatacttgtgtatcatagtgaaatgactgacatttttcctttctggg 396
Query: 242 cgatatgagcagtaacatttttaaaaagctgaaattagattttatgtaaattacctcaag 301
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 395 cgatatgagcagtaacatttttaaaaagctgaaattagatttgatgtaaattacctcaag 336
Query: 302 aaaggtttgactatctgattttgaatgtactaatttttaaaatgcagtcaatatgaataa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aaaggtttgactatctgattttgaatgtactaatttttaaaatgcagtcaatatgaataa 276
Query: 362 atgcattttggttttggaaataaaaatctgtattatagtcatatacacttgtatttcaaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atgcattttggttttggaaataaaaatctgtattatagtcatatacacttgtatttcaaa 216
Query: 422 attgagatttgtccactagctctgtggcctgaagcaaattatttaacatcggtgaatttc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 attgagatttgtccactagctctgtggcctgaagcaaattatttaacatcggtgaatttc 156
Query: 482 aattttctacaaaagagatatactaatattgtatcactttcattataggcatcttatgat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aattttctacaaaagagatatactaatattgtatcactttcattataggcatcttatgat 96
Query: 542 gattaacagatacaaacatatatgtaaggaa 572
|||||||||||||||||||||||||||||||
Sbjct: 95 gattaacagatacaaacatatatgtaaggaa 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
