Query= MSMg01no265_g21.b1 MSMg01no265_g21.b1 CHROMAT_FILE:
MSMg01no265_g21.b1 PHD_FILE: MSMg01no265_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:54 2005
(313 letters)
>mm_chrX_11823590_11824298
Length = 709
Score = 435 bits (225), Expect = e-126
Identities = 276/311 (88%), Gaps = 32/311 (10%)
Strand = Plus / Minus
Query: 4 ggaattcagctaaaggtgaaaggagagaaccacttccacaaagctggcctctgagtgctc 63
|||||||||||||||||||||||||||||||||| ||
Sbjct: 590 ggaattcagctaaaggtgaaaggagagaaccact------------------------tc 555
Query: 64 cacaaacacactatggtacacatacccatcacacatacacacacacaccaataatgacaa 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 554 cacaaacacactatggtacacatacccatcacacat--gcacacacaccaataatgacaa 497
Query: 124 taatacgtctgtaaaataaaggtcataaggataaaagcttaggcctccagcca-gcagcc 182
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 496 taatacgtctgtaaaataaaggtcataaggataaaagcttaggcctccag-caggcagcc 438
Query: 183 agtgccaaggcccaatttacgggagaaatcaacttttttttttttaaaaaactttgtaga 242
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 437 agtgccaaggcccaatttacgggagaaatcaacttttttttttt----aaactttctaga 382
Query: 243 gcaatctagctgccatttggttatgttcacctaatataccccagctccactgcacagagc 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 gcaatctagctgccatttggttatgttcacctaagataccccagctccactgcacagagc 322
Query: 303 tcgagaaccac 313
|||||||||||
Sbjct: 321 tcgagaaccac 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 709
Length adjustment: 9
Effective length of query: 304
Effective length of database: 700
Effective search space: 212800
Effective search space used: 212800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_g21.g1 MSMg01no265_g21.g1 CHROMAT_FILE:
MSMg01no265_g21.g1 PHD_FILE: MSMg01no265_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:54 2005
(287 letters)
>mm_chrX_11673161_11673847
Length = 687
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%)
Strand = Plus / Plus
Query: 2 aggcttgcatactgagactcaatctccaaaaattcgtgactgaatgattgaattcctgat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aggcttgcatactgagactcaatctccaaaaattcgtgactgaatgattgaattcctgat 261
Query: 62 tctcattctgttgccgaggcagaaaggggagcactgtgagagagcaggacagctggaggg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tctcattctgttgccgaggcagaaaggggagcactgtgagagagcaggacagctggaggg 321
Query: 122 gtggtgctaaggtgcagagagtggatctgtggttctggggaagactaaggcagaaggaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtggtgctaaggtgcagagagtggatctgtggttctggggaagactaaggcagaaggaat 381
Query: 182 taggaaagtgaagtacaaggcatgaagagttgataccatcgggaaagacccacgggagca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 taggaaagtgaagtacaaggcatgaagagttgataccatcgggaaagacccacgggagca 441
Query: 242 cgagatgattacaaagctctttcttggtcagaggagccgagtgg 285
|||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 442 cgagatgaagataaagctctttcttggtcagaggagccgagtgg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
