CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATAATTACCACCTGCTATTTCCAATAAACTTGCCAGGAAACAAC
TAAAAGAGAATCAATTTAAGTATAAATGACACAACAACCAGGCAGTCTAA
AGGGAATGCTCGGAACTGCCCCAGCTTTGTCTGAAGTTCTCTGCCTTCTC
TTGCCCTGCCTCTGCAACACTGTGAGGATTCTGTGTTCTGTATTAGTTGT
GAGGTGTCTAGCTATGCAGAGAACATCTTTCTCTCTTTCCTGCCCTCCCT
GGAAAAAGATTTGTAACAATAATAATGATCCCTTTCCATAAAGCTCAACT
TAGCTTTAATTCGACCTTTTGCAAAATGACTTCACGTTTATCATTGTGAT
CTTTTTTTACTTTACTCTTGCGACGCTCACATAAAGTACGTATGGAAGGA
TTTCTCACACCAGAGAACTGAGATGACTGTGAGTGGGTGCTGAGCCTGTC
AAGGACAGAGACAGGGATAAGTAGCAAGGATGCCAGACACAGTCTAGTCC
TGTTCTTTCAACAGCATTTCATCATTGAAGGAGACACCCTGTGACAATCT
CTTCTCTGTTCTTCATGATGAAATTTATCAGCTTATATGCTATAAGGGAA
GCAATGAAAAGGTCACAGGTTGGCATTAATTTAATCCAGAGCTGGCAGTA
TGAAGCTCTGAAAAGAGAN

TCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCACATTCCTGGTTGGTAGTTCCAGAAG
GAGCTCTGTGGTTCTTATTCCAGAAGAACTGTGGTTGGGGATCTGGATGT
GTCTGTCCTGTGTAAAGCCATGCTTTTGCTTTATTTCACCTGGGTGAACT
TGAGAGCCTCGACTCTGTTCCCAAGTAGCTTTTGCCAAATGAAATTCCTT
ATTTGGGAGGCAGCTTGATCTGACAGAAAGAGCACAGCCACTACAGTCAG
AATACTTAAGTTAATCTTTGCCTTAGCTTGCTCTGATTTTAGGCAAATCA
ATGCATGTCTTGGAGCCTTTGCTCTCATCTGTAAACTAGATATGATAATC
ATTCTCATTTCTGGGCTTGGAACTACTGTTTTGAGGATTCATTGAAAAAG
TCAGTATTTGATGCAGACAGCCCCACATACTGTTCCTTTACTGAGTTGGT
TTTCTCCTGTTCAGCCAATGGCTCTGGGTGGTGGGAATATACATTTTGGA
GGCAGAGAAAGGTTGGTGCAGGGGAGAGGCAGTCATGCTTTGGAAGAGAT
CACACACAGCTGGGGAGGTGGGCCAGTGGCTAAAGTGCTTGCCATTCAAG
CATGAGGACATGAATTTGACTCTCCAGTACCTACAAAAGATGAGCAGCTT
GGTCTTCAGACTGGTCCCTTTAGA

Query= MSMg01no266_m02.b1 MSMg01no266_m02.b1 CHROMAT_FILE:
MSMg01no266_m02.b1 PHD_FILE: MSMg01no266_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:37 2005
         (671 letters)



>mm_chrX_55929663_55930733
          Length = 1071

 Score = 1266 bits (655), Expect = 0.0
 Identities = 664/667 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaataattaccacctgctatttccaataaacttgccaggaaacaactaaaagaga 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gaattcaataatgagcacctgctatttccaataaacttgccaggaaacaactaaaagaga 812

                                                                       
Query: 65  atcaatttaagtataaatgacacaacaaccaggcagtctaaagggaatgctcggaactgc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atcaatttaagtataaatgacacaacaaccaggcagtctaaagggaatgctcggaactgc 752

                                                                       
Query: 125 cccagctttgtctgaagttctctgccttctcttgccctgcctctgcaacactgtgaggat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 cccagctttgtctgaagttctctgccttctcttgccctgcctctgcaacactgtgaggat 692

                                                                       
Query: 185 tctgtgttctgtattagttgtgaggtgtctagctatgcagagaacatctttctctctttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tctgtgttctgtattagttgtgaggtgtctagctatgcagagaacatctttctctctttc 632

                                                                       
Query: 245 ctgccctccctggaaaaagatttgtaacaataataatgatccctttccataaagctcaac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctgccctccctggaaaaagatttgtaacaataataatgatccctttccataaagctcaac 572

                                                                       
Query: 305 ttagctttaattcgaccttttgcaaaatgacttcacgtttatcattgtgatcttttttta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttagctttaattcgaccttttgcaaaatgacttcacgtttatcattgtgatcttttttta 512

                                                                       
Query: 365 ctttactcttgcgacgctcacataaagtacgtatggaaggatttctcacaccagagaact 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ctttactcttgcgacgctcacataaagtacgtatggaaggatttctcacaccagagaact 452

                                                                       
Query: 425 gagatgactgtgagtgggtgctgagcctgtcaaggacagagacagggataagtagcaagg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gagatgactgtgagtgggtgctgagcctgtcaaggacagagacagggataagtagcaagg 392

                                                                       
Query: 485 atgccagacacagtctagtcctgttctttcaacagcatttcatcattgaaggagacaccc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atgccagacacagtctagtcctgttctttcaacagcatttcatcattgaaggagacaccc 332

                                                                       
Query: 545 tgtgacaatctcttctctgttcttcatgatgaaatttatcagcttatatgctataaggga 604
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 331 tgtgacaatctcttctctgttcttcatgatgaaatttatcagcttatatgttataaggga 272

                                                                       
Query: 605 agcaatgaaaaggtcacaggttggcattaatttaatccagagctggcagtatgaagctct 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agcaatgaaaaggtcacaggttggcattaatttaatccagagctggcagtatgaagctct 212

                  
Query: 665 gaaaaga 671
           |||||||
Sbjct: 211 gaaaaga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no266_m02.g1 MSMg01no266_m02.g1 CHROMAT_FILE:
MSMg01no266_m02.g1 PHD_FILE: MSMg01no266_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:37 2005
         (290 letters)



>mm_chrX_55788371_55789060
          Length = 690

 Score =  530 bits (274), Expect = e-155
 Identities = 286/290 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacattcctggttggtagttccagaaggagctctgtggttcttattccagaagaactgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacattcctggttggtagttccagaaggagctctgtggttcttattccagaagaactgtg 260

                                                                       
Query: 61  gttggggatctggatgtgtctgtcctgtgtaaagccatgcttttgctttatttcacctgg 120
           ||||||||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 261 gttggggatttggatgtgcctgccctgtgtaaagccatgcttttgctttctttcacctgg 320

                                                                       
Query: 121 gtgaacttgagagcctcgactctgttcccaagtagcttttgccaaatgaaattccttatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaacttgagagcctcgactctgttcccaagtagcttttgccaaatgaaattccttatt 380

                                                                       
Query: 181 tgggaggcagcttgatctgacagaaagagcacagccactacagtcagaatacttaagtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggaggcagcttgatctgacagaaagagcacagccactacagtcagaatacttaagtta 440

                                                             
Query: 241 atctttgccttagcttgctctgattttaggcaaatcaatgcatgtcttgg 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctttgccttagcttgctctgattttaggcaaatcaatgcatgtcttgg 490


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space:   191361
Effective search space used:   191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)