Query= MSMg01no270_m14.b1 MSMg01no270_m14.b1 CHROMAT_FILE:
MSMg01no270_m14.b1 PHD_FILE: MSMg01no270_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:32 2005
(319 letters)
>mm_chrX_148632324_148633040
Length = 717
Score = 574 bits (297), Expect = e-168
Identities = 307/311 (98%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 5 gaattcttggctctgggcagtaccaataaaaagaaggagggagaaaagacccacacacac 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattcttggctctgggcagtaccaataaaaagaaggagggagaaaagacc--tacacac 262
Query: 65 acacactaaacaggactagcatctgggaagggtctatgccccaccctctgtcatgggcag 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acacactaaacaggagtagcatctgggaagggtctatgccccaccctctgtcatgggcag 322
Query: 125 actaacctcaagtgtctagaaggcagcctaacctgcttcccccatcttagagccttggct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 actaacctcaagtgtctagaaggcagcctaacctgcttcccccatcttagagccttggct 382
Query: 185 tacaaggttgctctactctcatctcacctagctcctcctaggcaaagtacagtccatgag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tacaaggttgctctactctcatctcacctagctcctcctaggcaaagtacagtccatgag 442
Query: 245 cttcctctcccaggaagacttcaagacagcaggagggccagcacaggctttgggtctgaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttcctctcccaggaagacttcaagacagcaggagggccagcacaggctttgggtctgaa 502
Query: 305 tccctaccctg 315
|||||||||||
Sbjct: 503 tccctaccctg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 717
Length adjustment: 9
Effective length of query: 310
Effective length of database: 708
Effective search space: 219480
Effective search space used: 219480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_m14.g1 MSMg01no270_m14.g1 CHROMAT_FILE:
MSMg01no270_m14.g1 PHD_FILE: MSMg01no270_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:32 2005
(314 letters)
>mm_chrX_148800177_148800890
Length = 714
Score = 491 bits (254), Expect = e-143
Identities = 311/360 (86%), Gaps = 46/360 (12%)
Strand = Plus / Minus
Query: 1 gggagggcctgggacctttagacatgagtacactttcctgaagaaacatttgaagtggaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 697 gggagggcctgggacctttagacatgagtacactttcctgaagaagcatttgaagtggaa 638
Query: 61 aggagaggaactagcctgttgcccagaggcatctcgacctgaaacttatcgtgtgtgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aggagaggaactagcctgttgcccagaggcatctcgacctgaaacttatcgtgtgtgtgt 578
Query: 121 gtgtgtgtgtgtgtgtg------------------------------------------- 137
|||||||||||||||||
Sbjct: 577 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgt 518
Query: 138 ---atataaatgactgcatttgtagtctgtgtatacatgtctcatcactgcactgtatgt 194
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gatatataaatgactgcatttgtagtctgtgtatacatgtctcatcactgcactgtatgt 458
Query: 195 gtatatcatcatatacactgtaggtgtatatgagtttatgtgtgtgtgaacaggttatat 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gtatatcatcatatacactgtaggtgtatatgagtttatgtgtgtgtgaacaggttatat 398
Query: 255 gatagcatatgggattatgtgggtgtctgaatatatttgtgcctgtactagagggcatgg 314
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 397 gatagcatatgggattatgtgggtgtctgaatagatttgtgtctgtactagagggcatgg 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
