XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
AACTGAGGAAACTCTAATGGCTGAGAAGCACCTAAACATCTTTAGTCCTT
GGGCAAATGCAAATCACAACAACTCTGAGATCCCACATCACACCACTCAG
AATGGCTAAGATCAAAAACTCAGGAGACAACAAATGCTGGCAAGGATGTG
AAGAAAAAGGAACACTCCTCCATTGCTGGTGGGATTGCAAATGGGTACAA
CCAAACTGGAAATCAGTCTTGCTGTTCCTTAGAAATTTGGACAGATTATT
ACCCGAGGACCCAGCAATACCACTCCTGGGCATATACCCAAAAGTTTCTC
ATAGCTTTCTTAATTATACCCACCCCCCAAGCTAGAAACAAACCATATGT
CCCTTAATAGACAAATGGATACAGAAATTGTGGTACCTTTACACAATGGA
ATACTCCTCAGCTATTTAAAACAATGACTTCATAAACTTTGCAGGCAAAT
CGATGGATTTAGAAAATACCATCATGGGTGAGGTAACTCAGTCACAAAAG
ACCACATGTGGTATGTACTCACTGATAAGTGTATATTAGGCAAAGAGCGT
GGAATACCTAAGATACAACTTAGAGACCACATGAAGCTCAAGAAGAAGGA
AGACCAAAGAGTGGATGCTTCAGTCCTACTTAGAAGGTGGAACACAATAG
TCAATGAAATTAGAGGGTGGGAAGGACTTGTGAGGAAGAGAAGAGGGAGA
TAGGAAAAAGAGG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATGAAGAAACAAAAAAGAAAAAAAAAGAA
AAGAAAAGAAAAGAAGAGAACAAGGAAAAAAGAAAAAAGAAAAAGAAACA
GGACCAGGGAACTGAAGATGGAAGAACTCAGATAATGGGTCCAAGATAAT
ATTTAACCATGCTCTGCAAACATTAGTGTTATTTCTCTTAGAAAGTTAAA
AAGTATATAAACAGCAGTGGGGAAAATAAATATTGTTAATTCTTGATGTG
ATCCCAGAGTCTTCTGACTATGTTCATATTACCCTCCTTTCCAGCTCCCT
TTAATGCCAATGGATGTGGTGGCTGAAGAATAGAATCTTAAGTTAGTCTG
TGTGGGTTTTTTTGTTGTTGTTTGTTAAAATTGTGAATATATTTTATTTA
ATTTTTTCCAAAATTTTTTTAGGTAGTTACTTCATTTACATTTCAAATGC
TATCCCGAAAGTCCCCTATACCCCCCCTGCCGCACCCTTACCCACCCACT
CCCACTTCTTAACCCTGGTGTTTCCCCTGTACTGGGGCATATAAAGTTTG
CAATACCAAGGGGCCTCTCTTCCCAATGATGGCTGACTAGGCCATCTTCT
GCTAAAAATGCAGCTAGAGACACAAGCTCTGAGGGTGCTGGTTAGTTCAT
ATTGTTGTCCCACCTATAGGGTTGCAGACAAATTCAGCTCCTTGTGTAC

Query= MSMg01no271_m20.g1 MSMg01no271_m20.g1 CHROMAT_FILE:
MSMg01no271_m20.g1 PHD_FILE: MSMg01no271_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:45 2005
         (650 letters)



>mm_chrX_111281465_111282514
          Length = 1050

 Score = 1125 bits (582), Expect = 0.0
 Identities = 635/664 (95%), Gaps = 21/664 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgaagaaacaaaaaagaaaaa----aaaagaaaagaaaagaaaagaag---------- 46
           |||||| |||||||| |||||||    |||||||||||||||||||||||          
Sbjct: 661 catgaaaaaacaaaagagaaaaaaaataaaagaaaagaaaagaaaagaagagaaaaagga 602

                                                                       
Query: 47  ----agaacaaggaaaaaagaaaaaagaaaaagaaacaggaccagggaactgaagatgga 102
               |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaaagaaaaaggaaaaaagaaaaaagaaaaagaaacaggaccagggaactgaagatgga 542

                                                                       
Query: 103 agaactcagataatgggtccaagataatatttaaccatgctctgcaaacattagtgttat 162
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 541 agaactcagataatgggtccaagataatatttaaccatgttctgcaaacattagtgttat 482

                                                                       
Query: 163 ttctcttagaaagttaaaaagtatataaacagcagtggggaaaataaatattgttaattc 222
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 ttctcttagaaagttataaagtatataaacagcagtggggaaaataaatattgttcattc 422

                                                                       
Query: 223 ttgatgtgatcccagagtcttctgactatgttcatattaccctcctttccagctcccttt 282
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 ttgatgtgatcccagagtcttctgactatgttcatattaccctcctttccagctccctgt 362

                                                                       
Query: 283 aatgccaatggatgtggtggctgaagaatagaatcttaagttagtctgtgtgggtttttt 342
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgccaatggatgtggtggctgaagaatagaatcttaagttagtctgtgtgggtttttt 302

                                                                       
Query: 343 tgttgttgtttgttaaaattgtgaatatattttatttaattttttccaaaatttttttag 402
           |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||
Sbjct: 301 tgttgttgtttgttaaaattgtgaatatattttatttaattttt-ccaaa--ttttttag 245

                                                                       
Query: 403 gtagttacttcatttacatttcaaatgctatcccgaaagtcccctataccccccctgccg 462
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtatttacttcatttacatttcaaatgctatcccgaaagtcccctataccccccctgccg 185

                                                                       
Query: 463 cacccttacccacccactcccacttcttaaccctggtgtttcccctgtactggggcatat 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cacccttacccacccactcccacttcttaaccctggtgtttcccctgtactggggcatat 125

                                                                       
Query: 523 aaagtttgcaataccaaggggcctctcttcccaatgatggctgactaggccatcttctgc 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aaagtttgcaataccaaggggcctctcttcccaatgatggctgactaggccatcttctgc 65

                                                                       
Query: 583 taaaaatgcagctagagacacaagctctgagggtgctggttagttcatattgttgtccca 642
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  taaaaatgcagctagagacacaagctctgagggtgctggttagttcatattgttgtccca 5

               
Query: 643 ccta 646
           ||||
Sbjct: 4   ccta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)