Query= MSMg01no272_e08.b1 MSMg01no272_e08.b1 CHROMAT_FILE:
MSMg01no272_e08.b1 PHD_FILE: MSMg01no272_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:23 2005
(317 letters)
>mm_chrX_17199449_17200165
Length = 717
Score = 569 bits (294), Expect = e-166
Identities = 309/314 (98%)
Strand = Plus / Plus
Query: 4 ggaattcattagttctctgaagacaaagcaagactattgcttaaatgagttccagaaaga 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattagttctttgaagacaaagcaagactattgcttaaatgagttccagaaaga 263
Query: 64 aacgttctagtcttggtggccagcagtttgctgaaagagataactttgtgaaactgaagc 123
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 264 aacgttctagtcttggtggccagcagtttgctgaaggagataactttgtgaaactgaagc 323
Query: 124 cagacgacaggcgggcccgaaaggcaagaagtgtctcctcacaacgcaagtcaacagagt 183
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 cacacgacaggcgggcccgaaaggcaagaagtgtctcctcaccacgcaagtcaacagagt 383
Query: 184 cgaggagtcttcaaccaactcttcaaagaagactgcgaggccgctctgtgaagaaacgcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgaggagtcttcaaccaactcttcaaagaagactgcgaggccgctctgtgaagaaacgcc 443
Query: 244 gtttggtggagaatggttactctgaggagaaaacgtatacaggggagaaaattccttcca 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atttggtggagaatggttactctgaggagaaaacgtatacaggggagaaaattccttcca 503
Query: 304 ctgagaaaaattct 317
||||||||||||||
Sbjct: 504 ctgagaaaaattct 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_e08.g1 MSMg01no272_e08.g1 CHROMAT_FILE:
MSMg01no272_e08.g1 PHD_FILE: MSMg01no272_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:23 2005
(286 letters)
>mm_chrX_17320596_17321281
Length = 686
Score = 466 bits (241), Expect = e-136
Identities = 271/293 (92%), Gaps = 20/293 (6%)
Strand = Plus / Plus
Query: 1 acttgggagactgaagcaggaagatgctgagtttgaggccagcctagactatatagtgag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgggagactgaagcaggaagatgctgagtttgaggccagcctagactatatagtga- 259
Query: 61 ttccatgccaacctaagctgtacagtgaaactctgt----------tcatcctactacat 110
|||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 260 ---------aacctaagctgtacagtgaaaccctgtgacccaatgttcatcctactacat 310
Query: 111 aacatatataacagtaatgtacctggaaaactttccttaacttttgttctaccaaaagtt 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aacatatataacagtaatgtacctggaaaactttccttaacttttgttctaccaaaagtt 370
Query: 171 agttgcctaccgagatggttttcttgcctagttatacaatagctatggtattatgccaca 230
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agttgcctaccaagatggttttcttgcctagttatacaatagctatggtattatgccaca 430
Query: 231 tatcttctataatttcagtgtcacatattttaattcaaggcacttctggaatt 283
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tatcttctataatttcagtgtcacatattttaattcaaggcacttctggaatt 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
