Query= MSMg01no275_i10.b1 MSMg01no275_i10.b1 CHROMAT_FILE:
MSMg01no275_i10.b1 PHD_FILE: MSMg01no275_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:17 2005
(314 letters)
>mm_chrX_160020439_160021153
Length = 715
Score = 455 bits (235), Expect = e-132
Identities = 290/313 (92%), Gaps = 11/313 (3%)
Strand = Plus / Plus
Query: 5 gaattcaccctc---ttacccttctgcttgtctttaaa-taccagatgggtttttagaga 60
|||||||||||| || |||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gaattcaccctcgcatt---cttctgcttgtctttaaaataccagatgggtttttagaga 261
Query: 61 attcaccatgtcatgcaggtaatgtcattttgagttgctggccaggaattcttaaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 attcaccatgtcatgcaggtaatgtcattttgagttgctggccaggaattcttaaagaaa 321
Query: 121 tctgaataatataaggctgcttttgtaaagtcagcaaatgtttcacataaaagagaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tctgaataatataaggctgcttttgtaaagtcagcaaatgtttcacataaaagagaaact 381
Query: 181 tatttgcccccaccatacttctgagggtgtgcgcacgcgcgtgtgcgcacgcgctcgtgc 240
||||||||||||||||||||||||||||||||||||| || |||| ||| | | | |
Sbjct: 382 tatttgcccccaccatacttctgagggtgtgcgcacgagcacgtgcacacacacacacac 441
Query: 241 gcgtgtgcacacacacacacacgtgtggtatgtttcataacaggactcagttctcctgct 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aca----cacacacacacacacgtgtggtatgtttcataacaggactcagttctcctgct 497
Query: 301 cactcccttcagg 313
|||||||||||||
Sbjct: 498 cactcccttcagg 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_i10.g1 MSMg01no275_i10.g1 CHROMAT_FILE:
MSMg01no275_i10.g1 PHD_FILE: MSMg01no275_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:17 2005
(297 letters)
>mm_chrX_160167329_160168025
Length = 697
Score = 572 bits (296), Expect = e-168
Identities = 296/296 (100%)
Strand = Plus / Minus
Query: 1 ttaacagaggaatcagtaatggctgagaagcacttaaagaaatgtgcaatgtccttagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttaacagaggaatcagtaatggctgagaagcacttaaagaaatgtgcaatgtccttagcc 578
Query: 61 accagggaaatgcaaaccaacacgattttgagattccatcttacacctgccagaagggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 accagggaaatgcaaaccaacacgattttgagattccatcttacacctgccagaagggct 518
Query: 121 aagataaaaaactcaaaagatgtatatataatcaaaaaagggcaaagtcttgtgtcttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aagataaaaaactcaaaagatgtatatataatcaaaaaagggcaaagtcttgtgtcttgt 458
Query: 181 gagcaccttcactttagcaaatattaattgccaacagcaactaagggagaggtgggacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gagcaccttcactttagcaaatattaattgccaacagcaactaagggagaggtgggacct 398
Query: 241 catgtgcccttccttgcctccatgatgcagtgttgatatgcccacttttttgctta 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 catgtgcccttccttgcctccatgatgcagtgttgatatgcccacttttttgctta 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
