Query= MSMg01no278_f23.b1 MSMg01no278_f23.b1 CHROMAT_FILE:
MSMg01no278_f23.b1 PHD_FILE: MSMg01no278_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:41 2005
(647 letters)
>mm_chrX_7381122_7382168
Length = 1047
Score = 613 bits (317), Expect = e-179
Identities = 317/317 (100%)
Strand = Plus / Minus
Query: 331 ataaagccacatatgggaattccacacctgaccaccaatgcacacctttgatctcagcag 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ataaagccacatatgggaattccacacctgaccaccaatgcacacctttgatctcagcag 988
Query: 391 tcgggtggtagagacaggtggatttctgtgagttcaagaccagcctggtgtacagagcaa 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 tcgggtggtagagacaggtggatttctgtgagttcaagaccagcctggtgtacagagcaa 928
Query: 451 atactaggacagctaaggttgcagagagctctacttcatctcaaaaaaggcaggagcact 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 atactaggacagctaaggttgcagagagctctacttcatctcaaaaaaggcaggagcact 868
Query: 511 aaaaatattttataaaattaccttcatgctatatgtataaggtatgtttagatttaggtt 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 aaaaatattttataaaattaccttcatgctatatgtataaggtatgtttagatttaggtt 808
Query: 571 tcatccccaagatatctcagtaagtatatgcaaatattccaaatgagacaaaatctgaag 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tcatccccaagatatctcagtaagtatatgcaaatattccaaatgagacaaaatctgaag 748
Query: 631 caagcataagcattaca 647
|||||||||||||||||
Sbjct: 747 caagcataagcattaca 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_f23.g1 MSMg01no278_f23.g1 CHROMAT_FILE:
MSMg01no278_f23.g1 PHD_FILE: MSMg01no278_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:41 2005
(285 letters)
>mm_chrX_7219721_7220405
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Plus
Query: 1 cacaaaagccttccatgaactccccctagaacctttcaagctcagaaccattgctatgca 60
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 201 cacaaaagccttccatgaactccccctagaaccttccatgctcagaaccattgctatgca 260
Query: 61 aggacatcaacctgaggccagagctaggggccccagaccagttccattctgcccacacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggacatcaacctgaggccagagctaggggccccagaccagttccattctgcccacacat 320
Query: 121 gagcccccccatcacagcacagggaaggaaggccattgtctttgagtaccatcccagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcccccccatcacagcacagggaaggaaggccattgtctttgagtaccatcccagact 380
Query: 181 gtccctcacacatcctgatccctcctatcccttctgtcctttcctatttcagagctgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gtccctcacacatcctgatccctcctatcccttctgtcctttcctatttcacagctgttt 440
Query: 241 ggcttctctgccacgcatgcatctgtcttctctctcaggcaccta 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcttctctgccacgcatgcatctgtcttctctctcaggcaccta 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
