Query= MSMg01no289_f23.b1 MSMg01no289_f23.b1 CHROMAT_FILE:
MSMg01no289_f23.b1 PHD_FILE: MSMg01no289_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:40 2005
(318 letters)
>mm_chrX_39246172_39246889
Length = 718
Score = 600 bits (310), Expect = e-176
Identities = 316/318 (99%)
Strand = Plus / Plus
Query: 1 aaaccatagactttgactggcctagctgccctgaggcacacgcctcacaggttttcaggt 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 201 aaaccatagactttgactggcctagctgccctgaggcatatgcctcacaggttttcaggt 260
Query: 61 tagagtccatggctcatggagcacaatatgttgtgcagttcctgaaagactaatacactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagagtccatggctcatggagcacaatatgttgtgcagttcctgaaagactaatacactc 320
Query: 121 cctcagacagtgaagggttcaggccactttatggttctctgtatattccctcagaagtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcagacagtgaagggttcaggccactttatggttctctgtatattccctcagaagtca 380
Query: 181 aggaagtatgtaagcttgacttggtcttagacaatcttgtgtactctgaatagcttgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaagtatgtaagcttgacttggtcttagacaatcttgtgtactctgaatagcttgcac 440
Query: 241 acattatatcctggcaactacaactgtattgatcctggcaactgccattatattctcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattatatcctggcaactacaactgtattgatcctggcaactgccattatattctcttt 500
Query: 301 ctgataaaggtataaaaa 318
||||||||||||||||||
Sbjct: 501 ctgataaaggtataaaaa 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_f23.g1 MSMg01no289_f23.g1 CHROMAT_FILE:
MSMg01no289_f23.g1 PHD_FILE: MSMg01no289_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:40 2005
(346 letters)
>mm_chrX_39423923_39424668
Length = 746
Score = 572 bits (296), Expect = e-168
Identities = 327/346 (94%), Gaps = 14/346 (4%)
Strand = Plus / Minus
Query: 1 tagacaaggatgaagacaccagtccaaagtctgctttggacaataaacaatataagtaag 60
||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 579 tagacaaggatgaagacaccagtccaaagtctg--------------caatataactaag 534
Query: 61 caattcatttttttcacctgagtcttcattagcatatctgtaaagaagagaacagaactc 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 caattcatttttttcacccgagtcttcattagcatatctgtaaagaagagaacagaactc 474
Query: 121 aacagtggggacgtatccagtcttactttttttccctttagttctagatactgacttcag 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 473 aacagtggggacgtatccagtcttacttttttcccctttagttctagatactgacttcag 414
Query: 181 agcctagtgtatactatgctggactgtgtatacccccaaagcctttgaggcctttacctc 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 413 agcctagtgtatactatgctggactgtgtacacccccaaagcctttgaggcctttacctc 354
Query: 241 caacccaaaacatttaccattttaaaaactgtataacacgcatgaggagtgataacatgc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 353 caacccaaaacatttaccattttaaaaactgtataacatgcatgaggagtgataacatgc 294
Query: 301 acaaaaagcaaacacttaaggaccaaacaatgccacataatataaa 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 acaaaaagcaaacacttaaggaccaaacaatgccacataatataaa 248
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
