Query= MSMg01no290_f19.b1 MSMg01no290_f19.b1 CHROMAT_FILE:
MSMg01no290_f19.b1 PHD_FILE: MSMg01no290_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:53 2005
(542 letters)
>mm_chrX_84448459_84449400
Length = 942
Score = 953 bits (493), Expect = 0.0
Identities = 499/501 (99%)
Strand = Plus / Minus
Query: 5 ggaattctacataattgaccactttctgttcctataatccctttatccatggcatatgct 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaattctacataatagagcactttctgttcctataatccctttatccatggcatatgct 442
Query: 65 gtccttccatgttacatgtatcctaaatgaatctattttctactctaacacatttaaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccttccatgttacatgtatcctaaatgaatctattttctactctaacacatttaaaaa 382
Query: 125 atacaatccttaccatttataccctctgatcctggtttttagtgtttgccctgaattagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacaatccttaccatttataccctctgatcctggtttttagtgtttgccctgaattagg 322
Query: 185 atggtcttgtgcttgacatcccacttcttaaaagtcatcaagtgtttatctgtcattaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggtcttgtgcttgacatcccacttcttaaaagtcatcaagtgtttatctgtcattaag 262
Query: 245 caatctagactgactactccaaatgtaagcaggaatcagcaccattggcagtagatacaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatctagactgactactccaaatgtaagcaggaatcagcaccattggcagtagatacaa 202
Query: 305 atttacagaatgagtctgcttgttaacgagatccccagaggttctgttggcacatttaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttacagaatgagtctgcttgttaacgagatccccagaggttctgttggcacatttaag 142
Query: 365 tttgaaaagtcttgcattaagccagcataaaaaccacttgggacttagctaaaactgcat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tttgaaaagtcttgcattaagccagcataaaaaccacttgggacttagctaaaactgcat 82
Query: 425 tatttataggagaacctgtggtagggtagcccagaaatgtgtgtttcttttcttcttctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tatttataggagaacctgtggtagggtagcccagaaatgtgtgtttcttttcttcttctt 22
Query: 485 cttcttcttcttcttcttctt 505
|||||||||||||||||||||
Sbjct: 21 cttcttcttcttcttcttctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_f19.g1 MSMg01no290_f19.g1 CHROMAT_FILE:
MSMg01no290_f19.g1 PHD_FILE: MSMg01no290_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:53 2005
(347 letters)
>mm_chrX_84279575_84280329
Length = 755
Score = 617 bits (319), Expect = 0.0
Identities = 343/355 (96%), Gaps = 8/355 (2%)
Strand = Plus / Plus
Query: 1 aagatcatggtaaggttaggaatggttgatcaataatgtgagtttaacggggctgtgaat 60
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 201 aagatcatggtaaggttaggaatggttgatcaataatgtgagtgtaacagggctgtgaat 260
Query: 61 gaagctatgaagataaaaatatggtcagattatggaaggtataatttttatcttctagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagctatgaagataaaaatatggtcagattatggaaggtataatttttatcttctagat 320
Query: 121 agcagatcagcacacaatattcatagtagaggttttggtcttactgcaaattataaagga 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 agcagatcagcacacaatattcatagtagaggttttggtattactgcaaattataaagga 380
Query: 181 gatcttcttattaaatcaaact-ca-------caaattaactcttgcatttttgctaaaa 232
|||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 381 gatcttcttattaaatcaaactgcaaatctcgcaaattaactcttgcatttttgctaaaa 440
Query: 233 acctcacagcttactataaagggtttttaatttctgttgactcaaccctccatactgatt 292
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctcacagcttactataaatggtttttaatttctgttgactcaaccctccatactgatt 500
Query: 293 cccacagtaggaatgatgatcatctcaagttcacaaaaaccactacatgtaggct 347
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccacagtaggaatgatgatcatctcaagttcacaaaaaccactacatgtaggct 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 755
Length adjustment: 9
Effective length of query: 338
Effective length of database: 746
Effective search space: 252148
Effective search space used: 252148
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
