Query= MSMg01no290_g01.b1 MSMg01no290_g01.b1 CHROMAT_FILE:
MSMg01no290_g01.b1 PHD_FILE: MSMg01no290_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:54 2005
(584 letters)
>mm_chrX_161766660_161767643
Length = 984
Score = 1114 bits (576), Expect = 0.0
Identities = 582/584 (99%)
Strand = Plus / Plus
Query: 1 gaattctttctgtgacttaaaaggtatagaatctaaattgagaggatctgacaagtaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 201 gaattctttctgtgacttaaaaggtatagaatctaaattgagaggaactgagaagtaaaa 260
Query: 61 taaatagggtaaactagatgctctctaaatcgtcttccagatctcaaataatagtgtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaatagggtaaactagatgctctctaaatcgtcttccagatctcaaataatagtgtcac 320
Query: 121 aattctgtgctagcatctgggtgtttcttttacaactcactccatttaactccttctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattctgtgctagcatctgggtgtttcttttacaactcactccatttaactccttctagt 380
Query: 181 atattaacttggctctgttttgaaagaaggggtgaaaatttgttttactttgagcataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atattaacttggctctgttttgaaagaaggggtgaaaatttgttttactttgagcataat 440
Query: 241 tacagtattatatttgggacagtcatttttttctactattatctcttctttattttgggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacagtattatatttgggacagtcatttttttctactattatctcttctttattttgggg 500
Query: 301 atattcttaagtcttcacactcgcatgtacacatgagtacacacggccttttccatactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atattcttaagtcttcacactcgcatgtacacatgagtacacacggccttttccatactg 560
Query: 361 aattaactgaagaggtatatttccgggaactgatcttattttggctggagtatcaggcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattaactgaagaggtatatttccgggaactgatcttattttggctggagtatcaggcct 620
Query: 421 gcagagatacaatcaggtctagagtttctgtgtggtgtagatgatctttaaagtgaacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcagagatacaatcaggtctagagtttctgtgtggtgtagatgatctttaaagtgaacag 680
Query: 481 attcaaaactggaataaagggatgtctcacactacaccatagagtttttgtttgtgtgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attcaaaactggaataaagggatgtctcacactacaccatagagtttttgtttgtgtgtt 740
Query: 541 tgtgtttaaaatgaggcacttttttcctaagtttaagtattatt 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtgtttaaaatgaggcacttttttcctaagtttaagtattatt 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_g01.g1 MSMg01no290_g01.g1 CHROMAT_FILE:
MSMg01no290_g01.g1 PHD_FILE: MSMg01no290_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:54 2005
(520 letters)
>mm_chrX_161934228_161935148
Length = 921
Score = 915 bits (473), Expect = 0.0
Identities = 509/521 (97%), Gaps = 1/521 (0%)
Strand = Plus / Minus
Query: 1 catgaaaaacattattaggactttcaaggaagtataaactgtattcatacctaagttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 721 catgaaaaacattattaggactttcaaggaagtataaactgtattcataattaagttcag 662
Query: 61 gatgatccatgattgctaggtatactggtttgaaattaaatcaaaatattgaaacttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatgatccatgattgctaggtatactggtttgaaattaaatcaaaatattgaaacttaag 602
Query: 121 tgttaaatatctgatatttgcagacaaaattgcatgtagaaaaagatgaccttgttatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgttaaatatctgatatttgcagacaaaattgcatgtagaaaaagatgaccttgttatac 542
Query: 181 agtctaccgagataaggaagaaactgttggcatgaagcccagatattctgaaaccttggg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 541 agtctaccgagataaggaagaaactgttggcatgaagcccagatattctgaaaccttgag 482
Query: 241 ggaaaataactatttttttctttctggaaccttttgaattctgacttgaaactacagcat 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 481 ggaaaataactatttttttctttctggaaccttttgaattctaacttgaaactacagcat 422
Query: 301 ccatgagtgggatggacagatatttccctcctctcattcatccctttaatgaaaagtcat 360
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccatgagtggggtgaacagatatttccctcctctcattcatccctttaatgaaaagtcat 362
Query: 361 tgaaaatgg-aaatatgcacagaggagtttaactacaaaagatattatattacaatactc 419
||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 361 tgaaaatggaaaaaatgcacagaggagtttaactacaaaagatagtatattacaatactc 302
Query: 420 aggaggccaaggtctcctgcctccatgagatcagcaataataatacagggcacctatgaa 479
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 aggaggctaaggtctcctgcctccatgagaacagcaataataatacagggcacctatgaa 242
Query: 480 tgaaaccatgggactctcaggtatttgtgttgtccgtattc 520
|||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 tgaaaccacgggactctcaggtatttgtgttgtccgtattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 921
Length adjustment: 10
Effective length of query: 510
Effective length of database: 911
Effective search space: 464610
Effective search space used: 464610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
