Query= MSMg01no290_i09.b1 MSMg01no290_i09.b1 CHROMAT_FILE:
MSMg01no290_i09.b1 PHD_FILE: MSMg01no290_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:06 2005
(237 letters)
>mm_chrX_156273663_156274299
Length = 637
Score = 410 bits (212), Expect = e-119
Identities = 232/242 (95%), Gaps = 8/242 (3%)
Strand = Plus / Minus
Query: 1 cttcacttatcttgtcaac-aacatttactgaag----attttgacacatagtagtttta 55
||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||
Sbjct: 576 cttcacttatcttgtcaacaaacatttactgaagaccaa---tgatacatagtagtttta 520
Query: 56 acaattttttttcaaggaattgtaaatagagtggtgactaatgcagacaaggtcccaaat 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 acaattttttttcaaggaattgtaaatagagtggtgactaatgcagacaaggtcccaaat 460
Query: 116 tatggcatttacattctagtggctgacatttaagacttggtaatatgaaacaaactgttg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 459 tatggcatttacattctagtggctgacatttaagacttggtaatatgaaacaaacagttg 400
Query: 176 ccacaaatatagcaaaattcgagtctactttttggagtttcaaatcttccataatcaaga 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccacaaatatagcaaaattcgagtctactttttggagtttcaaatcttccataatcaaga 340
Query: 236 tt 237
||
Sbjct: 339 tt 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no290_i09.g1 MSMg01no290_i09.g1 CHROMAT_FILE:
MSMg01no290_i09.g1 PHD_FILE: MSMg01no290_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:06 2005
(288 letters)
>mm_chrX_156110223_156110910
Length = 688
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%)
Strand = Plus / Plus
Query: 1 cacagctgtagtagaattcctacaatgggtatgtgctggggttaggccaggtagtaatga 60
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 201 cacagctgtagtagaattcctacaatgggtatgtgctgggggcaggggaggtagtaatga 260
Query: 61 aacttcttttgaaagaggattttaaatgtgcttgaggaaggcaaggaagggtcagtgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttcttttgaaagaggattttaaatgtgcttgaggaaggcaaggaagggtcagtgtgg 320
Query: 121 tttcctctcatcttgctgtctactttctctctgaccagacactggttcttttgttaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcctctcatcttgctgtctactttctctctgaccagacactggttcttttgttaacac 380
Query: 181 agactgctctgtgactcagcccttgctctagctctgattgctcctactgagcacgttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactgctctgtgactcagcccttgctctagctctgattgctcctactgagcacgttttc 440
Query: 241 ctgttgaaatgctctcaacttctctccttttgacctggatatgg 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgttgaaatgctctcaacttctctccttttgacctggatatgg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
