Query= MSMg01no291_a14.b1 MSMg01no291_a14.b1 CHROMAT_FILE:
MSMg01no291_a14.b1 PHD_FILE: MSMg01no291_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:43 2005
(310 letters)
>mm_chrX_157975708_157976418
Length = 711
Score = 586 bits (303), Expect = e-172
Identities = 306/307 (99%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 5 gaattctctggctcaaatcttctgtac-caacaatgactcctctttttctcatggcatca 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctggctcaaatcttctgtacacaacaatgactcctctttttctcatggcatca 264
Query: 64 gtatctattgaagaagaggattttagagctgatgatggctctgggggaatcctacaagtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtatctattgaagaagaggattttagagctgatgatggctctgggggaatcctacaagtc 324
Query: 124 agtggggcatggggaaagagagaggagtttgccaagaaatcagcctccagtgcaaatctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtggggcatggggaaagagagaggagtttgccaagaaatcagcctccagtgcaaatctt 384
Query: 184 ccacctggtccatgtattgtggtactcattcaagtagaagcccaaggttttttctttctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccacctggtccatgtattgtggtactcattcaagtagaagcccaaggttttttctttctc 444
Query: 244 tttagcttgtcttcatccaattcatggttttcttcagatgaataaaatactcctatattt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttagcttgtcttcatccaattcatggttttcttcagatgaataaaatactcctatattt 504
Query: 304 atagtcg 310
|||||||
Sbjct: 505 atagtcg 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 711
Length adjustment: 9
Effective length of query: 301
Effective length of database: 702
Effective search space: 211302
Effective search space used: 211302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_a14.g1 MSMg01no291_a14.g1 CHROMAT_FILE:
MSMg01no291_a14.g1 PHD_FILE: MSMg01no291_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:43 2005
(282 letters)
>mm_chrX_158173614_158174295
Length = 682
Score = 538 bits (278), Expect = e-157
Identities = 281/282 (99%)
Strand = Plus / Minus
Query: 1 aacctgtctacgtccaaagactgggccttgcctccttttattactctctgacatgggaaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 395 aacctgtctacgtccaaagactgggccttgcctccttttactactctctgacatgggaaa 336
Query: 61 taagagtaagtagacccagtctgtcaagagacagctacaactgtggagaggtagtaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taagagtaagtagacccagtctgtcaagagacagctacaactgtggagaggtagtaaggg 276
Query: 121 acggtgagaagatgtcagcctcaggagacaaggcatacaccctaagagtaatgtgaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 acggtgagaagatgtcagcctcaggagacaaggcatacaccctaagagtaatgtgaggat 216
Query: 181 aaactggcattatccattcattaattcaacagtatttactaagaaactgttaggtgccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aaactggcattatccattcattaattcaacagtatttactaagaaactgttaggtgccag 156
Query: 241 gtgcttgttctaggtgctgagggatttgatagtcaacaatat 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gtgcttgttctaggtgctgagggatttgatagtcaacaatat 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
