CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACATTTTCTATCCCCTTTGAATGGGCTGGCTGGTTCAAAGCAGTCC
TTCTGATTTAAACTCCTCTCTATGCTGACTGGTTTAAATTGGCTTTTCTC
AGCTTCTGACTGGATTGTCCTGCTTAGAAAAACTGACTCTGAACTCCCTG
GACCTAACTGTTATGAATTGAAATGAACTGAGCAGAATTGACTTAACTGA
GATAAGCTAAACTGAGCTTGATTGAACTGAACTGAATGGAACTGAATTCC
ACTGAAATGCCTTCTCTCACTGCTCATTAATTAGTTCTTCCTGTCTTTTC
TCATGAGAGTAGGTCATATCCTATTTCTGTCTCATTCTGTCAAAACTTTT
TCTGATTCATTACTTTGTCTGCTCCTCAATTACACATCATTTTCTAGGAG
CAAAGGTGTGAGCAAAATGCATGTCTGTATTATAGCCAAAAGGAATAAAA
ATGTGTATTCTAACTAAAGGTAAAAATGGTATATTTTTATACATGGCTAT
ATTATAGTTGAAACATATGGATGTGATGCTGCTGGATTAAAATTTCTCTA
CAGAGAGGTGGAGCTTACCTACTTGCATTGCATGGCTTGTTCAGCCTGCT
TTTTTATAAAATGCACATTCCTTAGCCCAGGTTGCTAGTGTCCATAATGG
GCTTGGCCCTGTCTACATTGATCGCTAATTGAAAAAATN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXGAAATCTGCTTGCTTCTGCCTCCCAAG
TGCTGGGATTAAAGGTGTGTGCCACCACTGCCTGGCCCAAGTCTTTTTAG
ATACATAACTAACACAATGGAAACAGAAGCTAATATTTATTGAGTTACAA
ATATTCATTTAGTTAGTGAAACTGATAGAAAAACAGACACATGATAGATA
GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA
TAGACAGAAAGATAGAAAGATAGATGATAGATAGTTGTAAAATATATAAA
TAGATAGTTGTCTTCATTCAGGTATGTCTAAAAATTTGTATTTAGCCAAA
GATGACTCTGAACTTCTGATCCTTCTGGTTTGATACTCTGAATGTAGGGC
TTTCAGGTACAGTCATGCCAAATTTATATGGTGCTAGATTAAAACAAAGA
AAACCACTATGTAAGACAAACACTTAACCAGCTGAGCTACCTCTACATTC
TGTACTTATATCCTTGTCTAACACAACCTATAGTTAGATAAGTTGTCAAG
TAATAACCACCTTCAGGTGTAGGGGCGAGGATAACGGTGTTTAAGTGTTA
TCCCCTACATTCATAAATCTGATAAATAGTACAGTAGTAAAATATTAAAG
GCTATATTAACTGCAGTGCCTTATTTATTTCCTAAATAA

Query= MSMg01no291_b21.g1 MSMg01no291_b21.g1 CHROMAT_FILE:
MSMg01no291_b21.g1 PHD_FILE: MSMg01no291_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:50 2005
         (666 letters)



>mm_chrX_116053728_116054793
          Length = 1066

 Score = 1141 bits (590), Expect = 0.0
 Identities = 633/666 (95%), Gaps = 30/666 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaatctgcttgcttctgcctcccaagtgctgggattaaaggtgtgtgccaccactgcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gaaatctgcttgcttctgcctcccaagtgctgggattaaaggtgtgtgccaccactgcct 290

                                                                       
Query: 61  ggcccaagtctttttagatacataactaacacaatggaaacagaagctaatatttattga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggcccaagtctttttagatacataactaacacaatggaaacagaagctaatatttattga 350

                                                                       
Query: 121 gttacaaatattcatttagttagtgaaactgatagaaaaacagacacatgatagatagat 180
           |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 351 gttacaaatattcagttagttagtgaaactgatagaaaaacagacacatgacagatagat 410

                                                                       
Query: 181 agatagatagatagatagatagatagatagatagatagatagatagatagacagaaagat 240
           |||||||||||||||||||||||||||||||||||||||||||            |||||
Sbjct: 411 agatagatagatagatagatagatagatagatagatagataga------------aagat 458

                                                                       
Query: 241 agaaagatagatgatagatagttgtaaaatatataaatagatagttgtcttcattcaggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agaaagatagatgatagatagttgtaaaatatataaatagatagttgtcttcattcaggt 518

                                                                       
Query: 301 atgtctaaaaatttgtatttagccaaagatgactctgaacttctgatccttctggtttga 360
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aagtctaaaaatttgtatttagccaaagatgactctgaacttctgatccttctggtttga 578

                                                                       
Query: 361 tactctgaatgtagggctttcaggtacagtcatgccaaatttatatggtgctagattaaa 420
           |||                  |||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tac------------------aggtacagtcatgccaaatttatatggtgctagattaaa 620

                                                                       
Query: 421 acaaagaaaaccactatgtaagacaaacacttaaccagctgagctacctctacattctgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaaagaaaaccactatgtaagacaaacacttaaccagctgagctacctctacattctgt 680

                                                                       
Query: 481 acttatatccttgtctaacacaacctatagttagataagttgtcaagtaataaccacctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttatatccttgtctaacacaacctatagttagataagttgtcaagtaataaccacctt 740

                                                                       
Query: 541 caggtgtaggggcgaggataacggtgtttaagtgttatcccctacattcataaatctgat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caggtgtaggggcgaggataacggtgtttaagtgttatcccctacattcataaatctgat 800

                                                                       
Query: 601 aaatagtacagtagtaaaatattaaaggctatattaactgcagtgccttatttatttcct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaatagtacagtagtaaaatattaaaggctatattaactgcagtgccttatttatttcct 860

                 
Query: 661 aaataa 666
           ||||||
Sbjct: 861 aaataa 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)