Query= MSMg01no291_d23.b1 MSMg01no291_d23.b1 CHROMAT_FILE:
MSMg01no291_d23.b1 PHD_FILE: MSMg01no291_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:59 2005
(616 letters)
>mm_chrX_95246807_95247822
Length = 1016
Score = 893 bits (462), Expect = 0.0
Identities = 468/470 (99%)
Strand = Plus / Minus
Query: 1 cccaagcaattgagtaagagggcaaaggacaagggtgagaaggtgcttcttcagctcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cccaagcaattgagtaagagggcaaaggacaagggtgagaaggtgcttcttcagctcctg 411
Query: 61 tcttttagctgtgtcagtctgccagcctgactttcactggaaccagtttacactaataaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 410 tcttttagctgtgtcagtctgccagcctgactttcactggaaccagtttacactaacaaa 351
Query: 121 acaatttgcttttccagaagctccctgggcatatcttatggtcttatattgacattagtt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acgatttgcttttccagaagctccctgggcatatcttatggtcttatattgacattagtt 291
Query: 181 tttggccctgggtcattagaaacctgaatgaatttcaaggagtcccagcacccttgatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tttggccctgggtcattagaaacctgaatgaatttcaaggagtcccagcacccttgatag 231
Query: 241 gttaccaaacgttttgaactggctagttcaaacatgcatttactaagcaaagcactctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gttaccaaacgttttgaactggctagttcaaacatgcatttactaagcaaagcactctgt 171
Query: 301 gccaggccagtactaggaactggggtacaaagtgtgatgaggcctaagctctgcccttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gccaggccagtactaggaactggggtacaaagtgtgatgaggcctaagctctgcccttca 111
Query: 361 ggacctcatagcctatttacaaagtgagagccatgaagagattatttcaatacaaatcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ggacctcatagcctatttacaaagtgagagccatgaagagattatttcaatacaaatcta 51
Query: 421 ttaaggacaggctagaaattagaacttcaagacttataagcaatagaaga 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ttaaggacaggctagaaattagaacttcaagacttataagcaatagaaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_d23.g1 MSMg01no291_d23.g1 CHROMAT_FILE:
MSMg01no291_d23.g1 PHD_FILE: MSMg01no291_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:59 2005
(670 letters)
>mm_chrX_95462322_95463394
Length = 1073
Score = 1208 bits (625), Expect = 0.0
Identities = 660/673 (98%), Gaps = 3/673 (0%)
Strand = Plus / Minus
Query: 1 tcaccacatgggagaaaagtaggttgtggcccttggaaccaaagtattatacgacaagag 60
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 873 tcaccacatgggagaaaagtaggttgtggcccttggaaccaaagtaaaataagacaagag 814
Query: 61 gaatctcaatgaggacaaggaaatctagaaattactctgggagcttttagttcccacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gaatctcaatgaggacaaggaaatctagaaattactctgggagcttttagttcccacatt 754
Query: 121 gtgttatcatagtcaggcatattttttccatgtggaatttttaagtctctacagagaagc 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 753 gtgttatcatagtcaggcatattttttccacgtggaatttttaagtctctacagagaagc 694
Query: 181 agactggaaggtgaggaaactatagtcccaaacataccaatgatgtcaaccacttgataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 agactggaaggtgaggaaactatagtcccaaacataccaatgatgtcaaccacttgataa 634
Query: 241 acatcgacttctgcctgtctcaaattctcaacacatgcttgccattttaagagtctgtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 633 acatcgacttctgcctgtctcaaattctcaacacatgcttgccattttaagagcctgccc 574
Query: 301 ttatgtgccagggcctatatcccacagaggtttgtcatgatacagcccggcgacttgtat 360
||||||| ||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 573 ttatgtggcagggcctatatcccacagaggtttgtcatgatacagtctggtgacttgtat 514
Query: 361 gaactaatttgtatatgctgagtctaccatgttgctctcaactctcttgtttctactctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaactaatttgtatatgctgagtctaccatgttgctctcaactctcttgtttctactctt 454
Query: 421 tattttaaatatgcaaactttccattatagtctgatgttctaaggcagatgacttggatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tattttaaatatgcaaactttccattatagtctgatgttctaaggcagatgacttggatc 394
Query: 481 agaataactctcagtgcttggtctctatgaggctccccccccc---aaaaaatctcctac 537
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 393 agaataactctcagtgcttggtctctatgaggctccccccccccaaaaaaaatctcctac 334
Query: 538 ctcttatttattgagaattatttatctgttttgtttaaacaaataacattgtttctgctg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ctcttatttattgagaattatttatctgttttgtttaaacaaataacattgtttctgctg 274
Query: 598 tgtccacaaacaggcacaatgttctcaaggtaaaaacacatccatctctctcctaattgt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgtccacaaacaggcacaatgttctcaaggtaaaaacacatccatctctctcctaattgt 214
Query: 658 ttcttcaacctcc 670
|||||||||||||
Sbjct: 213 ttcttcaacctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1073
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1063
Effective search space: 701580
Effective search space used: 701580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
