Query= MSMg01no293_b13.b1 MSMg01no293_b13.b1 CHROMAT_FILE:
MSMg01no293_b13.b1 PHD_FILE: MSMg01no293_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:23 2005
(676 letters)
>mm_chrX_130297163_130298238
Length = 1076
Score = 725 bits (375), Expect = 0.0
Identities = 413/441 (93%), Gaps = 24/441 (5%)
Strand = Plus / Minus
Query: 260 ttatttgggtgcaggtaacataagtgtgctcagtttgtgggaattcactgagccatgccc 319
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 1075 ttatttgggtgcaggtaacataagtgtactcagtttgtgggaattcactgaaccatgtcc 1016
Query: 320 ttactacttgtgtacttctctgtatgttatgcttcaataaaggtctgcagaaataaaaca 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 ttactacttgtgtacttctctgtatgttatgcttcaataaaggtctgcagaaataaaaca 956
Query: 380 agttaccatatgtatgtgtgctcctgggaa------------------------acacac 415
|||||||||||||||||||||||||||||| ||||||
Sbjct: 955 agttaccatatgtatgtgtgctcctgggaaacacacacacacacacacacacacacacac 896
Query: 416 acacacacacacacacacagaatgtacaggtgtcttgaggggtacagaaaaagataatcc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 acacacacacacacacacagaatgtacaggtgtcttgaggggtacagaaaaagataatcc 836
Query: 476 aaggatgcttctgccaaggaagctagagactgaagtgaaagattatggaaagaaagtatt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 aaggatgcttctgccaaggaagctagagactgaagtgaaagattatggaaagaaagtatt 776
Query: 536 gttttttaccatgtgtcttttgtactttaaaattctgaactgcactgtgcatgatctctt 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gttttttaccatgtgtcttttgtactttaaaattctgaactgcactgtgcatgatctctt 716
Query: 596 ccatgtacataatatagttggaacaacagacaaaaaactgaaggaagtgaaatttagccc 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ccatgtacataatatagttggaacaacagacaaaaaactgaaggaagtgaaatttagccc 656
Query: 656 tgaagacctgtacaatataac 676
||||||||| |||||||||||
Sbjct: 655 tgaagacctttacaatataac 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_b13.g1 MSMg01no293_b13.g1 CHROMAT_FILE:
MSMg01no293_b13.g1 PHD_FILE: MSMg01no293_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:23 2005
(302 letters)
>mm_chrX_130136829_130137530
Length = 702
Score = 567 bits (293), Expect = e-166
Identities = 299/301 (99%)
Strand = Plus / Plus
Query: 1 caatgctgttacggcacccataatgctcacaattaatgattcagacaggcatccaccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgctgttacggcacccataatgctcacaattaatgattcagacaggcatccaccagc 260
Query: 61 taaatgttatgggatgctctgcagatgctacaattacaacatgcagcacactgttaatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaatgttatgggatgctctgcagatgctacaattacaacatgcagcacactgttaatag 320
Query: 121 gtgtcccagtttgaagtttcagaggcaatacatggctaatattgacaagacttcccccat 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 gtgtcccagtttgaagtttcagaggcaacacatggctaatattgacaagacttcccccat 380
Query: 181 gccagttgaatatgatggaagatggaggcatccatacatttcctgctgggtactctgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccagttgaatatgatggaagatggaggcatccatacatttcctgctgggtactctgcag 440
Query: 241 gcatgttcccatctctctgggatcccacagctattaacaaaagtgtgtgtgtgtgtgtgt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatgttcccatctctctgggatcccacagctattaacaaaagtgtgtgtgtgtgtgtgt 500
Query: 301 g 301
|
Sbjct: 501 g 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
