NAATATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTCTGTTCAAAGGCAGACTCGATTTGAGGAATTGAGTAT
GCCTGACTGCACAGGTAGGGGCAAAAGGAACCCAACTGGAAAGTTTAGAC
AGAATCTAGCAGATAATTAAACAGATGCCTCTTAAATGTTTACAAAATAA
TTCATTCGTAATCTGGGGACTGCCAGTATTGAGTCTTCAAGGAAGTTGTG
TGTTTGTATTTGTGTGTGTGTTCTTTTATCTATGTCAGAGTACCAAATGG
TAAAACACCTGTGCATTGAAAAATGAAATTAATTGCTAATAATGCATTTC
ATTTATCATGGAATCATGAGACTTTTGTAATACCCCCCCTTTTGCAAGGT
ACTTTTAAGTAATAACAAGGAATTTAATTAATTTAGCCACATCTATTATT
ACCATTACACCCATTTATGTGATTTATTCTCTCTGCTATTTTTTCTTGTT
CTACTTGTTCATTCATTTATTCATTTATCAAGTATTTGCTGAGTGTATAA
TGCTTGCCAGGCTGTGTCACATGCACCCCAATAGCAATTACAATATGATA
TGACTTGAATGACAGCTCAGCAGCTCAGAGGACCTAGGTTCAGTTCCTGG
AACCTATATAGTGTTTACAGCAATCCATATTTTCGCCATCAGAGGATTCA
ATGCCCTTTCTTATTCACAAAAGCCA

AATTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGTGGTCATAAGTATTTCT
TGTTGTTTGCTTGAGATTCTGGAGAAATACTGATACTCCAGAAGTTCATA
GCTGGTTTGTATGTCTATCATTACCTTGAATTTATTTAACTAATTATTCA
TTTCTTGCAGAATGGCAGACATTAAAATGTACAGTTTTATGCAAGCTTGA
AAAAGAGACAGAAAAAATACAAAAATGCCTGTTTATTTGTAGGATTGTGG
CTGAATTTGACTTCTGTGTATTTTTTTTATTTTCAAGCTATATAAGAGAT
ACCTATTACCGTTCTATTATTTTTTTTATCCCCCCCCACCCAGAAAAGTT
ATGTATTTTGTGTGTGCTTTATGCCCTATCTTTGCATTAATTTGCCTGTG
ATGAACTAGAAATGACGTTGGATACCGTTCTGTGCTGAGATGAAAGAAGA
CAGGCAATTAGAAGATAGAGAAATGAAGAATAACACTGCAAATGACTCTC
TGTGTCAAGAAACAAATGAAATTTCTGTTACCAAAAGTCACTCAGTTAAC
TGATGACAATTAAGAAAATTGTGTGTTTGCTTTTGAGAACTCCATAACAG
AATTCCATGCTTGCATATTAACTAAAGTTTAAAACAAAATTGCTACACTA
CAACTCTCAATTAGGTGCTAAACACTTTT

Query= MSMg01no294_f23.b1 MSMg01no294_f23.b1 CHROMAT_FILE:
MSMg01no294_f23.b1 PHD_FILE: MSMg01no294_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:02 2005
         (321 letters)



>mm_chrX_81312400_81313120
          Length = 721

 Score =  598 bits (309), Expect = e-175
 Identities = 315/317 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctctgttcaaaggcagactcgatttgaggaattgagtatgcctgactgcacagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctctgttcaaaggcagactcgatttgaggaattgagtatgcctgactgcacagg 264

                                                                       
Query: 65  taggggcaaaaggaacccaactggaaagtttagacagaatctagcagataattaaacaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taggggcaaaaggaacccaactggaaagtttagacagaatctagcagataattaaacaga 324

                                                                       
Query: 125 tgcctcttaaatgtttacaaaataattcattcgtaatctggggactgccagtattgagtc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcctcttaaatgtttacaaaataattcattcgtaatctggggactgccagtattgagtc 384

                                                                       
Query: 185 ttcaaggaagttgtgtgtttgtatttgtgtgtgtgttcttttatctatgtcagagtacca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaaggaagttgtgtgtttgtatttgtgtgtgtgttcttttatctatgtcagagtacca 444

                                                                       
Query: 245 aatggtaaaacacctgtgcattgaaaaatgaaattaattgctaataatgcatttcattta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 aatggtaaaacacctgtgcattgaaaaatgaaattaattgctaataatgtatttcattta 504

                            
Query: 305 tcatggaatcatgagac 321
           || ||||||||||||||
Sbjct: 505 tcgtggaatcatgagac 521


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space:   222144
Effective search space used:   222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no294_f23.g1 MSMg01no294_f23.g1 CHROMAT_FILE:
MSMg01no294_f23.g1 PHD_FILE: MSMg01no294_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:02 2005
         (284 letters)



>mm_chrX_81483806_81484489
          Length = 684

 Score =  526 bits (272), Expect = e-154
 Identities = 281/284 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcctgtgatgaactagaaatgacgttggataccgttctgtgctgagatgaaagaagacag 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 484 gcctgtgatgaactagaaatgacgttggataccgtcctgtgctgagatgaaagaagacag 425

                                                                       
Query: 61  gcaattagaagatagagaaatgaagaataacactgcaaatgactctctgtgtcaagaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gcaattagaagatagagaaatgaagaataacactgcaaatgactctctgtgtcaagaaac 365

                                                                       
Query: 121 aaatgaaatttctgttaccaaaagtcactcagttaactgatgacaattaagaaaattgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aaatgaaatttctgttaccaaaagtcactcagttaactgatgacaattaagaaaattgtg 305

                                                                       
Query: 181 tgtttgcttttgagaactccataacagaattccatgcttgcatattaactaaagtttaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgtttgcttttgagaactccataacagaattccatgcttgcatattaactaaagtttaaa 245

                                                       
Query: 241 acaaaattgctacactacaactctcaattaggtgctaaacactt 284
            |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 244 gcaaaattgctacactacaacactcaattaggtgctaaacactt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space:   185625
Effective search space used:   185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)