CTTTCTCCTCGTGTTTTTGTTNCTTTCTTTTTTTCTTCTTTTTTTTTNCC
NCCCTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTACTCTACTAGCCCTGTCT
GTCAGTTGCATTTTGGATGTTTTCACCTGGAAATGTAACCATAATATATG
CGGTTTTCATGAAAACATCTGTGCTTAGTTCTTTTTCCTCTGTGTGGAAG
ACTGGCTAGATGTTGACCAATGTATTTCCTTTTGGTAGGTACACAGAAAA
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTAAGCACGAAGTCCCCTTTTTTTTTTATCAATTATTTTCCATATATTTA
TTAAGCCAAATTTTTTTTTTTTTTCACCCCCCCCCCCCCCCCCTTGTTTT
AATTTTTATAACCGTTTTTCCCTTTCTTTTCTCCCCCCCCCTTTTATAAA
AAAATATATTTTTCCTCTCTTTTCTACAATTTATTTTACTTTATCATTTT
CTTCCACTCTTTTTTTTTATATTTATCTCTACTACTCCAGTGTTATTTTT
CTCTTTACTCTATTCTTTCCCCTTTTTATTATTTCTTCTCCCCACCCTTT
CTATCATTTTTTGACTCCTTACCCCTCGCTTTTTTGTTTTCTTTTTCTAT
CTTTCTCTTCCTTTTTTTTTTTTTTATCCACACTCCCCTCTACTTTTTTA
TGCTTCTCTTCTCTTCTAATCTATATCGTCGCGTAGTTTATTGTTCCCCC
TACTATATATCTTTTGTTATCCCCTCTTACTATCCCCACTACACATATCA
TCTACCCAATTAAATACAATTTTACACTCTTATTTAACCCTTAATCTCCG
CTAACACACAATTTCTCCTTTATTTTTATTCACCGTTATCATAGTTGTTA
TACCAG

CGATGCAGTGGGAGGCCTGGCGGCCGCCTGGGTCCTGACCTGAGGNGACC
TATAGAAGTTTCTAAGACTACTTACTCTACTAGCCCTGTCTGTCAGTTGC
ATTTTGGATGGGTTGAAACGGGAATGTAACCATAATATATGCGGTTTTCA
TGAAAACATCTGTGCTTAGTTCTTTTTCCTCTGTGTGGAAGACTGGCTAG
ATGTTGACCAATGTATTTCCTTTTGGTAGGTACACAGAAAAGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCCTA
TACACATCCACTTTTTTTTTTTAAAATCAACCCCTTCACTCCTTCTCCTC
CCTTTTTTTTTTTTCTCCTCACCCCCTCCCCTATTATCCAATTCACTTCT
TATTTTATTTTTTTATCTCCCCCCCCCTTTGTTTTTTTTCTTTTAATCTT
TTGCTACATTTATCTTATATACCTTTTTTTCTACCATCTTTTTATACTAT
TCTTCCTATTTTTTCTTCCCTTTTATCTACCCCGTTCCCCCATTATTTTC
TATTCTTTCTATTTTTTTATCCTCGTCGCTTTTTCCTCCTTTTCCCATTT
CTCTTTCCTTGTCCTTTCTATCTTTTTTATTTTTCATTTCTTATTATACA
TGTCTATTTTCCACTCCATTTTCTATTCTTACTCTCCCCTTTGTCTCCTC
ATTATTTTCTGCCTTTTCGCTTATCTTTTTATCCCCACTTCTAAATTGTT
CCTCTCTTCCTCTTCTTTATCCCTTATTTACCTTCCCCCCCCTTACAATA
TACATTTGCTTGTTCTTCTTCCTCTTTTTTTTTTTTATTTACCCTCTACT
TTCTCTATCN

Query= MSMg01no296_e11.b1 MSMg01no296_e11.b1 CHROMAT_FILE:
MSMg01no296_e11.b1 PHD_FILE: MSMg01no296_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:25 2005
         (174 letters)



>mm_chrX_82460555_82461128
          Length = 574

 Score =  304 bits (157), Expect = 2e-87
 Identities = 163/165 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtaaccataatatatgcggttttcatgaaaacatctgtgcttagttctttttcctctg 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 318 atgtaaccataatatatgcggttttcatgaaaacaactgtgcttagttctttttcctctg 259

                                                                       
Query: 61  tgtggaagactggctagatgttgaccaatgtatttccttttggtaggtacacagaaaagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgtggaagactggctagatgttgaccaatgtatttccttttggtaggtacacagaaaagt 199

                                                        
Query: 121 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 165
           |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 198 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtg 154


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space:    93956
Effective search space used:    93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no296_e11.g1 MSMg01no296_e11.g1 CHROMAT_FILE:
MSMg01no296_e11.g1 PHD_FILE: MSMg01no296_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:26 2005
         (224 letters)



>mm_chrX_82460555_82461178
          Length = 624

 Score =  398 bits (206), Expect = e-115
 Identities = 215/218 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttactctactagccctgtctgtcagttgcattttggatgggttgaaacgggaatgtaac 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 371 cttactctactagccctgtctgtcagttgcattttggatgggttgaaatgggaatgtaac 312

                                                                       
Query: 61  cataatatatgcggttttcatgaaaacatctgtgcttagttctttttcctctgtgtggaa 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 311 cataatatatgcggttttcatgaaaacaactgtgcttagttctttttcctctgtgtggaa 252

                                                                       
Query: 121 gactggctagatgttgaccaatgtatttccttttggtaggtacacagaaaagtgtgtgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gactggctagatgttgaccaatgtatttccttttggtaggtacacagaaaagtgtgtgtg 192

                                                 
Query: 181 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 218
           ||||||||||||||||||||||||||| ||||||||||
Sbjct: 191 tgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtg 154


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space:   132225
Effective search space used:   132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)