MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-297D01
Chromosome	X (Build37)
Map Location	102,265,566 - 102,266,113
singlet/doublet	singlet
Overlap gene	none
Upstream gene	C77370, Vcp-ps, EG621542, Uprt, Zdhhc15, Magee2, LOC622098, LOC676331, 5530601H04Rik
Downstream gene	2610029G23Rik, Magee1, LOC622159, LOC668454, E530001F21Rik, LOC622202, LOC100043213, LOC668458, Cypt2, EG633570, Fgf16, Atrx, 2610529C04Rik, Cox7b, Atp7a
Link	Open Mouse BAC browser

Click to get alignment info.

name	C77370 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245555 MGI:2148050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vcp-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:236937
definition	note : valosin containing protein pseudogene pseudo : _no_value

name	EG621542 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621542 MGI:3648913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins

name	Uprt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331487 MGI:2685620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108672 MGI:1915336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Magee2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:272790 MGI:2148316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622098 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs, 8 Proteins pseudo : _no_value

name	LOC676331 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676331
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	5530601H04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71445 MGI:1918695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	2610029G23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67683 MGI:1914933
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Magee1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107528 MGI:2148149
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins pseudo : _no_value

name	LOC668454 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668454
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	E530001F21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:279610 MGI:3036288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC622202 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622202
definition	note : ribosomal protein L30 pseudogene pseudo : _no_value

name	LOC100043213 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	LOC668458 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668458
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 12 Proteins pseudo : _no_value

name	Cypt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245566 MGI:2676331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG633570 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633570 MGI:3649027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 256 ESTs, 6 Proteins

name	Fgf16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80903 MGI:1931627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atrx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22589 MGI:103067
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610529C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67075 MGI:1914325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cox7b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66142 MGI:1913392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11977 MGI:99400
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C77370 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116325978 GeneID:245555 MGI:2148050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence C77370 transcript_id : NM_001077354.1

name	EG621542 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83003142 GeneID:621542 MGI:3648913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : predicted gene, EG621542 transcript_id : XM_887355.1

name	Uprt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487134 GeneID:331487 MGI:2685620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) transcript_id : NM_001081189.1

name	Zdhhc15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388664 GeneID:108672 MGI:1915336
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 15 transcript_id : NM_175358.3

name	Magee2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62990116 GeneID:272790 MGI:2148316
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoma antigen, family E, 2 transcript_id : NM_053206.1

name	5530601H04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271853 GeneID:71445 MGI:1918695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : RIKEN cDNA 5530601H04 gene transcript_id : XM_001479596.1

name	2610029G23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803459 GeneID:67683 MGI:1914933
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610029G23 gene transcript_id : NM_026312.3

name	Magee1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111378376 GeneID:107528 MGI:2148149
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoma antigen, family E, 1 transcript_id : NM_053201.3

name	LOC100043213 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271856 GeneID:100043213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100043213 transcript_id : XM_001479629.1

name	Cypt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91206397 GeneID:245566 MGI:2676331
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich perinuclear theca 2 transcript_id : NM_173436.1

name	EG633570 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407734 GeneID:633570 MGI:3649027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 256 ESTs, 6 Proteins product : predicted gene, EG633570 transcript_id : XM_001001613.1

name	Fgf16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126116562 GeneID:80903 MGI:1931627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor 16 transcript_id : NM_030614.2

name	Atrx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678608 GeneID:22589 MGI:103067
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha thalassemia/mental retardation syndrome X-linked homolog (human) transcript_id : NM_009530.1

name	2610529C04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981110 GeneID:67075 MGI:1914325
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610529C04 gene transcript_id : NM_025952.2

name	Cox7b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909318 GeneID:66142 MGI:1913392
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c oxidase subunit VIIb transcript_id : NM_025379.2

name	Atp7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352884 GeneID:11977 MGI:99400
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, Cu++ transporting, alpha polypeptide transcript_id : NM_009726.3

name	C77370 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116325979 GeneID:245555 MGI:2148050
definition	GO_function : GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 product : hypothetical protein LOC245555 protein_id : NP_001070822.1

name	EG621542 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83003143 GeneID:621542 MGI:3648913
definition	codon_start : 1 product : similar to 39S ribosomal protein L30, mitochondrial precursor (L30mt) (MRP-L30) protein_id : XP_892448.1

name	Uprt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487135 GeneID:331487 MGI:2685620
definition	codon_start : 1 product : uracil phosphoribosyltransferase (FUR1) homolog protein_id : NP_001074658.1

name	Zdhhc15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425060 CCDS:CCDS30332.1 GeneID:108672 MGI:1915336
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016409 - palmitoyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045184 - establishment of protein localization [Evidence IDA]; GO:0018345 - protein palmitoylation [Evidence IDA]; GO:0016188 - synaptic vesicle maturation [Evidence IMP] [Evidence IGI] codon_start : 1 product : zinc finger, DHHC domain containing 15 protein_id : NP_780567.1

name	Magee2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62990117 CCDS:CCDS30333.1 GeneID:272790 MGI:2148316
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : melanoma antigen, family E, 2 protein_id : NP_444436.1

name	5530601H04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271854 GeneID:71445 MGI:1918695
definition	codon_start : 1 product : hypothetical protein LOC71445 protein_id : XP_001479646.1

name	2610029G23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385810 CCDS:CCDS30334.1 GeneID:67683 MGI:1914933
definition	codon_start : 1 note : novel protein containing Domain of Unknown Function (DUF757) product : hypothetical protein LOC67683 protein_id : NP_080588.1

name	Magee1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111378377 GeneID:107528 MGI:2148149
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0030425 - dendrite [Evidence IDA]; GO:0016010 - dystrophin-associated glycoprotein complex [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEP] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : melanoma antigen, family E, 1 protein_id : NP_444431.3

name	LOC100043213 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271857 GeneID:100043213
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479679.1

name	Cypt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91206398 CCDS:CCDS30335.1 GeneID:245566 MGI:2676331
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : cysteine-rich perinuclear theca 2 protein_id : NP_775612.1

name	EG633570 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407735 GeneID:633570 MGI:3649027
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001001613.1

name	Fgf16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126116563 CCDS:CCDS30336.1 GeneID:80903 MGI:1931627
definition	codon_start : 1 product : fibroblast growth factor 16 protein_id : NP_085117.2

name	Atrx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678609 GeneID:22589 MGI:103067
definition	GO_component : GO:0000792 - heterochromatin [Evidence IDA]; GO:0000228 - nuclear chromosome [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : X-linked nuclear protein; alpha thalassemia/mental retardation syndrome (X-linked) product : alpha thalassemia/mental retardation syndrome X-linked homolog protein_id : NP_033556.1

name	2610529C04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981111 GeneID:67075 MGI:1914325
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008250 - oligosaccharyl transferase complex [Evidence ISS] GO_function : GO:0004579 - dolichyl-diphosphooligosaccharide-protein glycotransferase activity [Evidence ISS] GO_process : GO:0018279 - protein amino acid N-linked glycosylation via asparagine [Evidence ISS] codon_start : 1 exception : mismatches in translation product : implantation-associated protein protein_id : NP_080228.2

name	Cox7b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384754 GeneID:66142 MGI:1913392
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005746 - mitochondrial electron transport chain [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : cytochrome c oxidase subunit VIIb protein_id : NP_079655.1

name	Atp7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982812 GeneID:11977 MGI:99400
definition	GO_component : GO:0043025 - cell soma [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IDA] [Evidence IEA]; GO:0030140 - trans-Golgi network transport vesicle [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence ISS] [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0004008 - copper-exporting ATPase activity [Evidence ISS] [Evidence IDA] [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0046873 - metal ion transporter activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0030199 - collagen fibril organization [Evidence IMP]; GO:0006878 - copper ion homeostasis [Evidence IMP]; GO:0006825 - copper ion transport [Evidence IMP] [Evidence IDA] [Evidence ISS]; GO:0042417 - dopamine metabolism [Evidence IMP]; GO:0042414 - epinephrine metabolism [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0030001 - metal ion transport [Evidence IEA]; GO:0042421 - norepinephrine biosynthesis [Evidence IMP]; GO:0042415 - norepinephrine metabolism [Evidence IMP]; GO:0018205 - peptidyl-lysine modification [Evidence IMP]; GO:0043473 - pigmentation [Evidence IMP]; GO:0043588 - skin development [Evidence IMP]; GO:0006810 - transport [Evidence IEA]; GO:0006568 - tryptophan metabolism [Evidence IMP]; GO:0006570 - tyrosine metabolism [Evidence IMP] codon_start : 1 exception : mismatches in translation note : Menkes protein product : ATPase, Cu++ transporting, alpha polypeptide protein_id : NP_033856.2

name	LOC676331 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676331
definition	number : 1 pseudo : _no_value

name	LOC668454 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668454
definition	number : 2 pseudo : _no_value

name	LOC668454 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668454
definition	number : 1 pseudo : _no_value

name	LOC622098 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271852 GeneID:622098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs, 8 Proteins product : similar to Ribosomal protein L12 pseudo : _no_value transcript_id : XR_034284.1

name	LOC622159 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271855 GeneID:622159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to spermine synthase pseudo : _no_value transcript_id : XR_034293.1

name	E530001F21Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:95006997 GeneID:279610 MGI:3036288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E530001F21 gene pseudo : _no_value transcript_id : NR_002167.2

name	LOC668458 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271858 GeneID:668458
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 12 Proteins product : similar to small GTP binding protein pseudo : _no_value transcript_id : XR_034298.1

clone name	MSMg01-059F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055F12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-093K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200I08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-297D01.T7 (MSMg01no297_d01.b1)	MSMg01-297D01.TJ (MSMg01no297_d01.g1)
ACC	AG424594	AG424595
length	721	738
length of high quality (start - end)	536 (74 - 609)	362 (72 - 433)
definition	CHROMAT_FILE: MSMg01no297_d01.b1 PHD_FILE: MSMg01no297_d01.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:33:34 2005	CHROMAT_FILE: MSMg01no297_d01.g1 PHD_FILE: MSMg01no297_d01.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:33:34 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CATXXXXXXXXXXXXXXXXXXXXXXXXCTATTTTTCGAGCTCGGCGGAAT TCACTTCCGGTGCCATCAAAGAGAGCTAAAAGGTGGGGCATCCTGGTCAG TTGGCTTTAGCCTTCTTTTTACATTTTGTCTCTTTGTACCTTCACTGGTC CCTTCCAGAACAAACAGCCAAAGTCGTGCATAAAGAAAACACACTCCCGG ACTTTGTTTTTTACTTTATAAAAATAGCCGCTTGATGGCAGCATGATTTC ACTGATGCGCTCAGACCCGCTCTTCCCCCGCCCTTTGTGTTTAGAAAAAA CACCACCTCAGTCAAAAAACTATTTTCTTACAGAAATTTGGATCTTCTCT GGCATTTTATAGCCCCAGGTTTTCCTGATTCTAAGCCAATCTAATGACTG GAAAAAAATATTTTTAATGTGTTTCTTTGATTACTATTTCTTTATTTTGA TACTGGCTTACTGTATACTTTCTCGGATATGCATTTGTTTTTTTTGGTTT TTTTTTTTTTTTTGGTTAGGACAGCAATATCTCCCATAGAGAACAATTTT TATTTTATTATTTTTTTAANATACAGCGGCTTATAATGGTAAATAAAAGC ATGGAAGCTTAGCTTGCGCTTCTATTAATAATATGAGACTGCCCACTTTC CAACCATTATAAATTAACTTTTCCCATTTTAGAGGTAGGCAATTATAAAA CAAAGGAACGAAATGGTTATG	CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXTCACCTTGGTCCATTCTTTAGTGCCAGGT ATGTTTCATCTCATGGACCTGGGCCCTTGAGCCACTCAGAAAGTGGTTCC TTATTCCAACAGCCTTCATGCCGCTCTCACAGCAGTGAATCTATCTTGTT AGGCCAGTCATTGTTGTAGCTTGCAGATGAGTACCAGTTTGATGTTCCCA TGTTTCATGATTCAAGTATGTGTTATCTTCAGCAACATGGTCTTAGCATC AATTTCTAGAGGGTAGCAAGGAGTACTGACAATGACCTGTGGTATTTGGG GGCTATATGACCTTGTTGCTTGACAGCTCAAAATAAGGTAATTCATTCCT GGTGGTAACGTTTACATTCGCTAGCATGAGGTGTCTAATTGGTGTATTAT CTATGTCATAGAGCAACTCCATTAAGACATATTTTCACATGTATATATTT TACGAAGTTTCGCAGCAGCTGGATTCTGTATGGTTTTTTAAACAGGCCTT TTGCGCTAGTTATCCCCTTTTTTACCCTCTCCTTCTTCCATACTGTTTTA TATCCCAATTTTAACCACCTCCTGTTTTATTATGTCCTCTTCCCTTTGAA TGCCCCTTCCCCCCCTATGGGTCCCCTTATCCAAATCCTGATTCTCTTTT GAGTCATCTCCAAAAGGGAAACACTATTTTTCCAATGC
quality values	Open. Hide. 8 8 8 8 8 8 15 34 34 33 32 32 28 28 37 37 37 37 37 40 40 44 47 25 21 11 9 9 21 9 12 15 7 7 6 6 6 6 7 7 7 8 8 8 15 17 28 28 31 31 33 33 33 33 30 33 24 11 9 9 9 6 6 6 6 6 6 10 8 8 8 9 10 9 27 30 41 59 59 59 50 53 53 57 57 57 59 59 59 59 59 59 57 59 59 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 59 59 48 48 37 37 37 42 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 59 59 59 59 59 57 57 57 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 47 28 28 12 15 14 14 14 12 12 12 27 25 41 41 41 47 50 50 53 53 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 59 59 68 59 59 57 57 57 57 57 57 59 54 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 38 32 20 20 20 20 21 41 43 59 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 59 59 57 57 57 57 57 48 48 48 59 59 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 59 59 59 57 57 59 59 57 59 54 57 59 59 59 57 44 37 30 30 40 40 47 54 54 54 59 59 59 59 59 59 59 48 42 42 36 32 32 30 28 24 24 24 28 28 28 39 36 36 33 33 33 39 33 33 37 22 19 11 6 8 6 6 8 10 10 28 32 43 47 34 34 25 23 23 28 28 30 33 33 30 35 35 37 37 23 22 17 10 3 0 3 11 11 17 17 19 26 26 37 32 19 20 15 10 9 9 10 10 11 34 30 31 31 28 32 32 32 20 20 20 32 27 22 23 21 18 11 8 8 11 10 8 9 9 15 9 7 7 8 8 11 9 21 21 25 25 23 22 21 18 15 16 16 27 27 26 19 13 11 12 9 9 9 9 9 16 22 26 21 14 14 11 15 11 12 15 17 10 10 9 14 13 11 9 10 10 10 10 8 8 8 8 8 8 10 13 15 20 19 15 10 10 10 17 11 13 12 22 20 16 11 11 6 11 6 7 8 13 19 22 14 11 12 15 12 15 21 17 11 11 10 11 10 10 13 11 17 13 16 12 12	Open. Hide. 8 8 8 8 10 10 9 8 3 0 3 8 8 16 19 44 37 37 37 37 37 39 37 37 37 37 37 37 23 23 10 10 8 8 7 9 7 7 7 6 7 8 10 22 20 15 10 10 10 26 21 53 41 50 33 27 15 8 11 10 8 8 8 9 9 9 9 15 16 28 29 31 33 33 36 36 59 59 59 57 50 43 43 43 50 50 59 57 57 57 43 43 43 43 48 51 54 68 68 57 57 57 57 68 50 50 50 50 50 50 50 51 50 50 41 54 54 57 57 46 44 43 43 57 47 59 57 48 48 47 47 47 57 57 68 57 57 48 47 47 57 57 57 57 57 57 57 43 57 57 57 57 68 68 57 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 52 52 52 57 57 57 57 57 57 54 57 57 57 57 57 57 57 57 68 68 68 68 59 59 59 59 57 54 54 54 54 59 59 59 59 57 57 57 59 59 59 57 59 57 50 43 38 38 38 59 59 59 52 37 37 37 57 57 54 57 57 57 57 57 50 57 44 43 44 44 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 46 43 43 43 44 59 47 47 46 46 48 48 48 48 43 42 35 35 35 42 42 48 57 40 37 28 43 43 57 41 42 30 30 32 39 39 47 47 59 59 57 48 48 39 39 30 39 33 30 34 32 30 30 25 21 18 19 12 13 13 13 13 18 28 29 37 37 43 39 47 47 47 47 47 48 47 43 40 43 59 59 59 59 57 48 48 48 54 48 48 48 48 48 43 48 43 48 48 54 57 54 54 42 44 39 43 43 39 42 43 44 44 47 57 57 57 48 48 48 48 48 42 43 42 39 37 42 42 47 47 44 44 42 42 43 32 32 35 35 22 28 19 29 23 43 43 43 43 42 36 42 24 19 13 13 12 19 27 28 15 17 17 34 34 32 32 20 20 20 19 19 25 20 22 22 28 24 18 15 19 14 17 27 32 42 44 44 37 32 32 24 29 22 21 15 14 14 13 19 28 27 24 14 19 22 15 15 18 34 30 28 28 23 28 28 33 28 28 25 31 31 36 43 43 37 28 18 14 14 18 24 21 23 24 21 21 21 19 19 16 23 13 12 10 10 8 8 8 6 6 8 6 8 8 8 8 8 12 12 13 13 13 18 18 15 15 12 16 16 16 18 23 26 24 14 14 12 25 18 14 14 15 21 28 29 33 18 21 12 12 12 18 25 15 14 14 22 21 14 8 8 8 8 8 8 8 8 8 8 8 8 9 20 17 21 21 13 16 13 13 10 10 10 11 10 8 8 6 10 8 10 10 19 13 6 6 8 6 8 10 11 10 10 9 10 21 21 16 12 10 11 11 9 10 15 13 10 8 8 10 10 15 11 10 10 10 15 10 8 8 8 8 8 8 8 8 8 9 9 16 19 16 14 12 11 10 10 11 13 10 8 8 10 13 9 10 10 10 10 10 10 10 11 16 12 11 11 19 20 14 9 9 10 10 8 10 8 8 8 8 8 8 8 8 15 15 8 8 8 8 11 11 15 12 10 11 11 8 8 8 10 10 18 11 10 9 13 10 10 9 11 11 10 12 10 9 9 9 9 8 11 11 11 11 11 15 15 13 8 8 6 6 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no297_d01.b1 MSMg01no297_d01.b1 CHROMAT_FILE:
MSMg01no297_d01.b1 PHD_FILE: MSMg01no297_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:34 2005
         (536 letters)



>mm_chrX_102265366_102266301
          Length = 936

 Score =  897 bits (464), Expect = 0.0
 Identities = 522/549 (95%), Gaps = 16/549 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   agctaaaaggtggggcatcctggtcagttggctttagccttctttttacattttgtctct 60
           ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 201 agctaaacggtggggcatcctggtcagtcggctttagccttccttttacattttgtctct 260

                                                                       
Query: 61  ttgtaccttcactggtcccttccagaacaaacagccaaagtcgtgcataaagaaaacaca 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtaccttcactggtctcttccagaacaaacagccaaagtcgtgcataaagaaaacaca 320

                                                                       
Query: 121 ctcccggactttgttttttactttataaaaatagccgcttgatggcagcatgatttcact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcccggactttgttttttactttataaaaatagccgcttgatggcagcatgatttcact 380

                                                                       
Query: 181 gatgcgctcagacccgctcttcccccgccctttgtgtttagaaaaaacaccacctcagtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 gatgcgctcagacccgctcttcccccgccctttgtgtttagaaaaaacaacacctcagtc 440

                                                                       
Query: 241 aaaaaactattttcttacagaaatttggatcttctctggcattttatagccccaggtttt 300
           ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaactacttccttacagaaatttggatcttctctggcattttatagccccaggtttt 500

                                                                       
Query: 301 cctgattctaagccaatctaatgactggaaaaaaatatttttaatgtgtttctttgatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgattctaagccaatctaatgactggaaaaaaatatttttaatgtgtttctttgatta 560

                                                                       
Query: 361 ctatttctttattttgatactggcttactgtatactttctcggatatgcatttgtttttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatttctttattttgatactggcttactgtatactttctcggatatgcatttgtttttt 620

                                                                       
Query: 421 t------tggtttttttttttt-------ttttggttaggacagcaatatctcccataga 467
           |      | |||||||||||||       |||||||||||||||||||||||||||||||
Sbjct: 621 tgtttttttgttttttttttttgttttttttttggttaggacagcaatatctcccataga 680

                                                                       
Query: 468 gaacaatttttatttt-attatttttttaana-tacagcggcttataatggtaaataaaa 525
           | |||||||||||||| ||| ||||||||| | |||||| ||||||||||||||||||||
Sbjct: 681 gtacaatttttatttttatt-tttttttaaaaatacagcagcttataatggtaaataaaa 739

                    
Query: 526 gcatggaag 534
           |||||||||
Sbjct: 740 gcatggaag 748


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information