TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGGA
ATTCCAGAGATTTCTCCTTAACTCTGGAGGTATATGCTTGTGTATTAAGG
GATAATGATGCTGAGAAAGTTCTATATAAAGTTAAGCCATGACATGAATA
ACTAGGATGTATTTGTTATTAAAAAATTCTAGCATGAGAATCTAAGTATT
AAGCATTTGAATATGACCACAAATATAGTTTAATTATATAATTGTCCATG
ATGCAATTTGAAAGTGATTAAACCTTTAGGACCTGGAGCAGAGTGGAAAG
AAGTTACATTGTTGGGATGTGTCCTTGAAGATAGTAGTAAGACACAGGTA
ATTTTCTCAGCCTTGTATGTCTTCTTGACTCCATTAAGTTGAGCATCTTC
CTTTGCCATGAAGTGCTTCCTAATGTACTAAAGCCTAAATACAATGATGT
AGCCAATCCTAGATAGAAACTTTTAAACTATGAGCCCCCAATCTCTCTTT
CAAAGCTGATTTAACTCAAACACTTGTTTTAGTAACAGAAAACTGCCTAA
CACACCAGGGATGCTTCTATTCAGTATCCGGTAGAAAAGATGACCATTTT
TCTTTCTTTTTAATAAAGAGGATTTAACTGTTCTTACCCACAGGAAATAA
AAAGAGAAAAACCTGTCTATTTACCAACAGTTATCTGTAGAAAGAATAGC
CACTTACTGAATTCATTCATCAGGCTTTTCCT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGTA
GATAGGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATACA
AATCAAAACAACTATGAGATTCCAACTCACACCATTCAGAATGGCTAAAA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTTCATTTTTGATGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTTCTCAGAAAATTGGACATAGTACTACTGGAGGGTC
CCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAG
AAGAACACATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAAGCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGTGGTAACCCAATCACAAACGAACTCACACAATATGGACTCACTTATAA
GTGGATATTAGCCCAGAATCTTAGGATACCCAAGATGTAAGATACCATTT
GCTAAACGCATGAAACTCAAGAAGAACATAGACCATAG

Query= MSMg01no297_f12.b1 MSMg01no297_f12.b1 CHROMAT_FILE:
MSMg01no297_f12.b1 PHD_FILE: MSMg01no297_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:46 2005
         (689 letters)



>mm_chrX_113821713_113822804
          Length = 1092

 Score = 1247 bits (645), Expect = 0.0
 Identities = 676/689 (98%), Gaps = 7/689 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattccagag--atttctccttaactctggaggtatatgcttgtgtattaagggataat 63
           |||||||||||  |||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gaattccagagaaatt--tccttaactctggaggtatatgcttgtgtattaagggataat 835

                                                                       
Query: 64  gatgctgagaaagttctatataaagttaagccatgacatgaataactaggatgtatttgt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gatgctgagaaagttctatataaagttaagccatgacatgaataactaggatgtatttgt 775

                                                                       
Query: 124 tattaaaaaattctagcatgagaatctaagtattaagcatttgaatatgaccacaaatat 183
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tattaaaacattctagcatgagaatctaagtattaagcatttgaatatgaccacaaatat 715

                                                                       
Query: 184 agtttaattatataattgtccatgatgcaatttgaaagtgattaaacctttaggacctgg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 agtttaattatataattgtccatgatgcaatttgaaagtgattaaacctttaggacctgg 655

                                                                       
Query: 244 agcagagtggaaagaagttacattgttgggatgtgtccttgaagatagtagtaagacaca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agcagagtggaaagaagttacattgttgggatgtgtccttgaagatagtagtaagacaca 595

                                                                       
Query: 304 ggtaattttctcagccttgtatgtcttcttgactccattaagttgagcatcttcctttgc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ggtaattttctcagccttgtatgtcttcttgactccattaagttgagcatcttcctttgc 535

                                                                       
Query: 364 catgaagtgcttcctaatgtactaaagcctaaatacaatgatgtagccaatcctagatag 423
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 catgaagtgctttctaatgtactaaagcctaaatacaatgatgtagccaatcctagatag 475

                                                                       
Query: 424 aaacttttaaactatgagcccccaatctctctttcaaagctgatttaactcaaacacttg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aaacttttaaactatgagcccccaatctctctttcaaagctgatttaactcaaacacttg 415

                                                                       
Query: 484 ttttagtaacagaaaactgcctaacacaccagggatgcttctattcagtatccggtagaa 543
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 414 ttttagtaacagaaaactgcctaacacaccagggatgcttctattcagtatccggtggaa 355

                                                                       
Query: 544 aagatgaccatttttctttctttttaataaagaggatttaactg---ttcttacccacag 600
           ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct: 354 aagatgaccatttttctttctttttaataaagaggatttaactgttcttcttacccacag 295

                                                                       
Query: 601 gaaataaaaagagaaaaacctgtctatttaccaacagttatctgtagaaagaatagccac 660
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 294 gaaataaaaagagaaaaacctgtctatttaccaacatttatctgtagaaagaatagccac 235

                                        
Query: 661 ttactgaattcattcatcaggcttttcct 689
           |||||||| || |||||||||||||||||
Sbjct: 234 ttactgaactctttcatcaggcttttcct 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1092
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1082
Effective search space:   734678
Effective search space used:   734678
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)