Query= MSMg01no301_o12.b1 MSMg01no301_o12.b1 CHROMAT_FILE:
MSMg01no301_o12.b1 PHD_FILE: MSMg01no301_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:25 2005
(619 letters)
>mm_chrX_6838378_6839396
Length = 1019
Score = 1127 bits (583), Expect = 0.0
Identities = 607/615 (98%)
Strand = Plus / Plus
Query: 5 gaattcactggctgacctggagcaatgggacaccagcaataaatcctgaccttacaacta 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactggctgagatggagcaatgggacaccagcaataaatcctgaccttacaacta 264
Query: 65 atgcataaagaagaaactcttggccaatcagcacgggtggagactggatgatgatctaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgcataaagaagaaactcttggccaatcagcacgggtggagactggatgatgatctaac 324
Query: 125 ctgcaacaggccaattcagctttctaagatgatactcttttgggttattgctttctcttg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 ctgcaacaggccaattcagctttctaagatgatactcttttgggttattgctttctctag 384
Query: 185 gctctaaaaaagaattgtatgttcacacacaggtaaaaattggacaaataaaagtatttg 244
||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 gctctgaaaaacaattgtatgttcacacacaggtaaaaatcagacaaataaaagtatttg 444
Query: 245 aagtctcacaacactcctaacacatgacagtctataaaattgggagtaaatataactggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagtctcacaacactcctaacacatgacagtctataaaattgggagtaaatataactggt 504
Query: 305 gtgaatcaggataaaatatctaagacaggtacaataccccagggaaatcttacaccgtag 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgaatcaggataaaatgtctaagacaggtacaataccccagggaaatcttacaccgtag 564
Query: 365 tcaactctacagtgagcaaaaggttccataaaaaataatattggttaagtgttttatatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcaactctacagtgagcaaaaggttccataaaaaataatattggttaagtgttttatatg 624
Query: 425 tgcctagactataatcaatcagtttagtatacttttgaaatacatgtcttaagtacctac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcctagactataatcaatcagtttagtatacttttgaaatacatgtcttaagtacctac 684
Query: 485 ttatatattatggacaacacatttttagaggcaataaaataagatactttcacttgaaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttatatattatggacaacacatttttagaggcaataaaataagatactttcacttgaaaa 744
Query: 545 aagactgcttcattcctttggcttatatgtattgaaagacttatatggccagctgctaag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagactgcttcattcctttggcttatatgtattgaaagacttatatggccagctgctaag 804
Query: 605 atacagtatgtaggt 619
|||||||||||||||
Sbjct: 805 atacagtatgtaggt 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_o12.g1 MSMg01no301_o12.g1 CHROMAT_FILE:
MSMg01no301_o12.g1 PHD_FILE: MSMg01no301_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:25 2005
(629 letters)
>mm_chrX_7014365_7015392
Length = 1028
Score = 1071 bits (554), Expect = 0.0
Identities = 577/585 (98%), Gaps = 1/585 (0%)
Strand = Plus / Minus
Query: 1 acattcactttcaattagctcgggttcaaatattagaaggtagattctgaaaattttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 acattcactttcaattagctcgggttcaaatattagaaggtagattctgaaaattttaga 725
Query: 61 ttttgtgccctgaacacaaatcaccaatttacccaagactcagaccgctggactagcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ttttgtgccctgaacacaaatcaccaatttacccaagactcagaccgctggactagcctt 665
Query: 121 gaaagatttaggaggcagaggccacagtcatgtgtatcccagactgatactgtacaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaaagatttaggaggcagaggccacagtcatgtgtatcccagactgatactgtacaatgt 605
Query: 181 atggctctctgaatgtgaacttccaaatacctcaggcaagagacatacaacaaagaccgc 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 atggctctctgaacgtgaacttccaaatacctcaggcaagagacatacaacaaagaccgc 545
Query: 241 gaagaattcacttagttagcaaagacccaggaacaaatatgggatttagatcctctaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaagaattcacttagttagcaaagacccaggaacaaatatgggatttagatcctctaaaa 485
Query: 301 attcacaggccacacactctgaacccaggccttctaatccttangattaaaatgttggaa 360
||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 484 attcaaaggccacaca-tctgaacccaggccttctaatccttaggattaaaacgttggaa 426
Query: 361 cagaaacggaaaactttggcagtattattcctgaacaaaggcccccaaataattcagtct 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cagaaatggaaaactttggcagtattattcctgaacaaaggcccccaaataattcagtct 366
Query: 421 taattcctggcacagagacctcacacagtgaatgtagacccttaaacatgggacacttcc 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 365 taattcctggcacagagacctcacacagtgattgtagacccttaaacatgggacacttcc 306
Query: 481 acatttggaaatggacttctgcagactgcagaaatctttcaccatgagcaaagacccttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 305 acatttggaaatggacttctgcagactgcagaaatctttcaccatgagcaaagacacttt 246
Query: 541 aatgtgtcagactcagacaccgagacttaaacattctcaatgcaa 585
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aatgtgtcagactcagacaccgagacttaaacattctcaatgcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1028
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1018
Effective search space: 630142
Effective search space used: 630142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
