Query= MSMg01no306_o17.b1 MSMg01no306_o17.b1 CHROMAT_FILE:
MSMg01no306_o17.b1 PHD_FILE: MSMg01no306_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:50 2005
(305 letters)
>mm_chrX_140335490_140336199
Length = 710
Score = 538 bits (278), Expect = e-157
Identities = 297/306 (97%), Gaps = 5/306 (1%)
Strand = Plus / Minus
Query: 2 gaattccaattaatgattttcctgcagacagtatgaaggatgaagtgtatttattaaagt 61
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaattccaattaatgatacacctgcagacagtatgaaggatgaagtgtatttattaaagt 448
Query: 62 gttttaacatatcaaaaataacacacattgttaaggtggtaagtaaaacaaataggaaat 121
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttttaacatatcaaaaataagacacattgttaaggtggtaagtaaaacaaataggaaat 388
Query: 122 gttaattgtagaaataagtgaaacatgtctcactgtgtccttaaagattttcataaagca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gttaattgtagaaataagtgaaacatgtctcactgtgtccttaaagattttcataaagca 328
Query: 182 ttcaaagaagaaattcgaatcaccctggatgtgtgttggttttttca-----ttttgttt 236
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 327 ttcaaagaagaaattcgaatcaccctggatgtgtgttggttttttcattttgttttgttt 268
Query: 237 tgttttaacattagttcctgaggatccctctgaatttgaaagtatgacacacttgtacga 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgttttaacattagttcctgaggatccctctgaatttgaaagtatgacacacttgtacga 208
Query: 297 ttcttg 302
||||||
Sbjct: 207 ttcttg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 710
Length adjustment: 9
Effective length of query: 296
Effective length of database: 701
Effective search space: 207496
Effective search space used: 207496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_o17.g1 MSMg01no306_o17.g1 CHROMAT_FILE:
MSMg01no306_o17.g1 PHD_FILE: MSMg01no306_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:50 2005
(296 letters)
>mm_chrX_140216597_140217292
Length = 696
Score = 542 bits (280), Expect = e-158
Identities = 292/296 (98%)
Strand = Plus / Plus
Query: 1 tgggttttattgaagggaacaagagcgagggcacctgacagggtttttggccccattggg 60
||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 201 tgggttttattgaagggaacaagagtgagggcacctgacagggttcttggtcccattggg 260
Query: 61 agatttcctctttaattcattttctacactgtgtaatcaaatgaggttcacttaaagaaa 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 agatttcctctttaattcattttctacactgtgtaatcaaatgaggctcacttaaagaaa 320
Query: 121 aacataagttttagggttcttttttttaattctgtgtgctttggttttaggtagctatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacataagttttagggttcttttttttaattctgtgtgctttggttttaggtagctatag 380
Query: 181 atatccctgaccttgccaggaatactctagtgttatcctgaagtgtgctttaagtgaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatccctgaccttgccaggaatactctagtgttatcctgaagtgtgctttaagtgaagt 440
Query: 241 ggtcttcagaaaacacccgagacactcctagctcataaccttcacaccaaatctgt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtcttcagaaaacacccgagacactcctagctcataaccttcacaccaaatctgt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
